Bra035746 (Brassica rapa)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bra035746 T175030_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.872 0.872
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.872 0.872
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.872 0.872
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.842 0.842
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.812 0.812
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra035746.1-P EIN3 50 182

Links

Other EIN3 family TFs
Other Brassica rapa TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.722
Bo3g076180 Brassica oleracea Bo3g076180 I 0.789
Bra023927 Brassica rapa Bra023927 I 0.735
Cla011250 Citrullus lanatus Cla011250 I 0.767
Cla013874 Citrullus lanatus Cla013874 I 0.720
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.752
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.835
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.766
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.722
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.827
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.759
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.767
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.722
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.722
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.752
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.722
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.722
OS07G0685700 Oryza sativa OS07G0685700 I 0.722
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.786
Pm017011 Prunus mume Pm017011 I 0.782
29708.m000185 Ricinus communis 29708.m000185 I 0.827
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.788
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.700
Traes_2AS_409CAEDB6 Triticum aestivum Traes_2AS_409CAEDB6 I 0.711