MTR_5g087790 (Medicago truncatula)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 MTR_5g087790 T175106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.935 0.935
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.927 0.927
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.927 0.927
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.927 0.927
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.886 0.886
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET00045 EIN3 49 296

Links

Other EIN3 family TFs
Other Medicago truncatula TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_10236 Cicer arietinum Ca_10236 I 0.967
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.959
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.955
TCM_042022 Theobroma cacao TCM_042022 I 0.951
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.951
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.947
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.947
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.947
29708.m000185 Ricinus communis 29708.m000185 I 0.947
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.943
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.943
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.943
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.939
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.939
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.935
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.935
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.935
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.932
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.931
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.931
Ca_07534 Cicer arietinum Ca_07534 I 0.931
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.927
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.927
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.927
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.927
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.927
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.927
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.927
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.927
EIN3 Arabidopsis thaliana AT3G20770 D 0.927
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.927
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.923
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.923
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.923
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.923
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.923
Bo5g106280 Brassica oleracea Bo5g106280 I 0.915
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.906
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.902
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.899
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.898
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.898
MDP0000202831 Malus domestica MDP0000202831 I 0.898
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.895
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.894
PK13351.1 Cannabis sativa PK13351.1 I 0.894
Pm017009 Prunus mume Pm017009 I 0.894
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.887
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.887
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.886
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.886
EIL1 Arabidopsis thaliana AT2G27050 D 0.883
MDP0000564884 Malus domestica MDP0000564884 I 0.882
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.882
MDP0000212881 Malus domestica MDP0000212881 I 0.882
MDP0000306498 Malus domestica MDP0000306498 I 0.882
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.879
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.878
PK01239.1 Cannabis sativa PK01239.1 I 0.878
Bra000528 Brassica rapa Bra000528 I 0.875
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.874
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.874
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.874
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.874
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.874
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.874
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.874
Bo3g041690 Brassica oleracea Bo3g041690 I 0.867
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.866
mgf015996m Mimulus guttatus mgf015996m I 0.865
Bo1g108650 Brassica oleracea Bo1g108650 I 0.865
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.862
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.862
mgf018950m Mimulus guttatus mgf018950m I 0.861
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.859
Bo3g076180 Brassica oleracea Bo3g076180 I 0.858
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.857
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.854
Bra001802 Brassica rapa Bra001802 I 0.851
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.850
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.845
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.842
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.841
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.840
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.837
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.829
Bra035746 Brassica rapa Bra035746 I 0.827
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.823
MDP0000244873 Malus domestica MDP0000244873 I 0.816
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.809
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.809
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.806
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.806
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.805
gene00392-v1.0-hybrid Fragaria vesca gene00392-v1.0-hybrid I 0.804
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.801
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.801
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.801
F775_28545 Aegilops tauschii F775_28545 I 0.801
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.801
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.801
OS03G0324200 Oryza sativa OS03G0324200 I 0.801
OS03G0324300 Oryza sativa OS03G0324300 I 0.801
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.801
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.801
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.801
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.801
Pm017011 Prunus mume Pm017011 I 0.798
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.797
mgf012394m Mimulus guttatus mgf012394m I 0.794
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.793
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.793
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.793
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.793
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.789
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.785
Si034616m.g Setaria italica Si034616m.g I 0.785
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.785
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.780
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.777
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.773
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.773
OS07G0685700 Oryza sativa OS07G0685700 I 0.769
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.769
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.769
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.769
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.769
OBART07G26760 Oryza barthii OBART07G26760 I 0.766
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.757
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.752
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.749
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.749
Si029213m.g Setaria italica Si029213m.g I 0.745
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.743
Cla013874 Citrullus lanatus Cla013874 I 0.738
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.737
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.733
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.733
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.729
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.725
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.724
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.724
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.718
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.714
Bra023927 Brassica rapa Bra023927 I 0.713
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.713
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.713
LjSGA_055593.1 Lotus japonicus LjSGA_055593.1 I 0.711
Pm028171 Prunus mume Pm028171 I 0.711
Traes_2AS_409CAEDB6 Triticum aestivum Traes_2AS_409CAEDB6 I 0.711
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.709
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.709
PK19114.1 Cannabis sativa PK19114.1 I 0.709
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.709
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.709
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.709
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.707
Bo6g087550 Brassica oleracea Bo6g087550 I 0.705
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.704
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.704
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.700
Ca_02669 Cicer arietinum Ca_02669 I 0.700
MDP0000565880 Malus domestica MDP0000565880 I 0.700
MDP0000562585 Malus domestica MDP0000562585 I 0.700
MDP0000490180 Malus domestica MDP0000490180 I 0.700
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.700
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.700