PGSC0003DMG400005914 (Solanum tuberosum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 PGSC0003DMG400005914 T175190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.931 0.931
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.882 0.882
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.878 0.878
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.878 0.878
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.878 0.878
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.825 0.825
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400015145 EIN3 42 289
PGSC0003DMT400015146 EIN3 42 289

Links

Other EIN3 family TFs
Other Solanum tuberosum TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.992
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.927
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.927
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.906
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.898
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.894
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.894
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.894
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.890
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.890
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.890
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.886
TCM_042022 Theobroma cacao TCM_042022 I 0.886
29708.m000185 Ricinus communis 29708.m000185 I 0.886
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.886
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.886
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.886
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.886
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.886
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.882
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.882
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.882
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.882
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.882
EIL1 Arabidopsis thaliana AT2G27050 D 0.879
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.878
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.878
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.878
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.878
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.878
EIN3 Arabidopsis thaliana AT3G20770 D 0.878
mgf015996m Mimulus guttatus mgf015996m I 0.876
Bo5g106280 Brassica oleracea Bo5g106280 I 0.875
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.874
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.874
MDP0000202831 Malus domestica MDP0000202831 I 0.874
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.874
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.874
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.874
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.874
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.874
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.874
Pm017009 Prunus mume Pm017009 I 0.870
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.870
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.870
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.870
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.870
Ca_10236 Cicer arietinum Ca_10236 I 0.870
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.870
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.870
PK13351.1 Cannabis sativa PK13351.1 I 0.870
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.866
MDP0000564884 Malus domestica MDP0000564884 I 0.866
mgf018950m Mimulus guttatus mgf018950m I 0.866
MDP0000212881 Malus domestica MDP0000212881 I 0.866
PK01239.1 Cannabis sativa PK01239.1 I 0.866
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.866
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.866
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.862
Ca_07534 Cicer arietinum Ca_07534 I 0.862
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.862
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.858
MDP0000306498 Malus domestica MDP0000306498 I 0.858
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.858
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.858
Bra000528 Brassica rapa Bra000528 I 0.855
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.854
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.850
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.850
Bo1g108650 Brassica oleracea Bo1g108650 I 0.849
Bo3g041690 Brassica oleracea Bo3g041690 I 0.847
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.846
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.841
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.833
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.833
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.825
Bra001802 Brassica rapa Bra001802 I 0.823
Bo3g076180 Brassica oleracea Bo3g076180 I 0.821
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.821
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.817
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.813
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.809
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.809
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.809
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.805
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.805
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.801
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.797
Si034616m.g Setaria italica Si034616m.g I 0.797
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.797
mgf012394m Mimulus guttatus mgf012394m I 0.797
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.789
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.789
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.789
F775_28545 Aegilops tauschii F775_28545 I 0.789
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.789
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.788
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.788
OS03G0324300 Oryza sativa OS03G0324300 I 0.785
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.785
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.785
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.785
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.785
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.785
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.785
OS03G0324200 Oryza sativa OS03G0324200 I 0.785
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.785
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.785
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.785
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.785
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.773
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.769
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.764
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.762
OS07G0685700 Oryza sativa OS07G0685700 I 0.760
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.760
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.760
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.760
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.760
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.741
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.737
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.735
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.733
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.724
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.724
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.717
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.715
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.715
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.713
Si029213m.g Setaria italica Si029213m.g I 0.713
OBART07G26760 Oryza barthii OBART07G26760 I 0.711
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.711
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.711
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.711
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.707
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.707
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.707
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.707
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.704
Pm028171 Prunus mume Pm028171 I 0.703
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.703
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.703
PK19114.1 Cannabis sativa PK19114.1 I 0.703
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.703
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.703
MDP0000565880 Malus domestica MDP0000565880 I 0.703
MDP0000562585 Malus domestica MDP0000562585 I 0.703