PGSC0003DMG400008712 (Solanum tuberosum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 PGSC0003DMG400008712 T175192_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.963 0.963
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.927 0.927
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.927 0.927
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.927 0.927
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.906 0.906
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.850 0.850
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400022475 EIN3 50 181
PGSC0003DMT400022476 EIN3 50 297
PGSC0003DMT400022477 EIN3 50 297

Links

Other EIN3 family TFs
Other Solanum tuberosum TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.996
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.960
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.939
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.939
29708.m000185 Ricinus communis 29708.m000185 I 0.935
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.935
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.931
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.931
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.931
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.931
TCM_042022 Theobroma cacao TCM_042022 I 0.931
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.931
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.931
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.931
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.931
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.927
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.927
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.927
EIN3 Arabidopsis thaliana AT3G20770 D 0.927
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.927
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.927
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.923
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.923
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.923
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.923
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.923
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.923
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.923
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.923
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.919
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.919
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.919
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.919
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.915
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.915
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.915
Ca_10236 Cicer arietinum Ca_10236 I 0.915
Bo5g106280 Brassica oleracea Bo5g106280 I 0.911
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.907
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.907
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.906
Ca_07534 Cicer arietinum Ca_07534 I 0.906
EIL1 Arabidopsis thaliana AT2G27050 D 0.903
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.902
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.902
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.894
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.894
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.894
Pm017009 Prunus mume Pm017009 I 0.894
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.894
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.894
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.890
MDP0000202831 Malus domestica MDP0000202831 I 0.890
MDP0000212881 Malus domestica MDP0000212881 I 0.886
PK13351.1 Cannabis sativa PK13351.1 I 0.886
MDP0000564884 Malus domestica MDP0000564884 I 0.886
mgf015996m Mimulus guttatus mgf015996m I 0.884
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.882
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.882
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.882
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.882
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.882
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.878
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.878
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.878
PK01239.1 Cannabis sativa PK01239.1 I 0.878
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.878
MDP0000306498 Malus domestica MDP0000306498 I 0.874
Bra000528 Brassica rapa Bra000528 I 0.871
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.870
Bo3g041690 Brassica oleracea Bo3g041690 I 0.863
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.862
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.862
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.858
Bo1g108650 Brassica oleracea Bo1g108650 I 0.857
mgf018950m Mimulus guttatus mgf018950m I 0.853
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.850
Bra001802 Brassica rapa Bra001802 I 0.847
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.847
Bo3g076180 Brassica oleracea Bo3g076180 I 0.846
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.841
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.833
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.833
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.821
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.817
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.817
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.815
Cla011250 Citrullus lanatus Cla011250 I 0.811
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.809
mgf012394m Mimulus guttatus mgf012394m I 0.809
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.809
F775_28545 Aegilops tauschii F775_28545 I 0.805
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.805
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.805
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.801
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.801
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.801
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.801
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.801
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.801
OS03G0324300 Oryza sativa OS03G0324300 I 0.801
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.801
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.801
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.801
OS03G0324200 Oryza sativa OS03G0324200 I 0.801
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.798
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.794
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.793
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.789
Bra035746 Brassica rapa Bra035746 I 0.788
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.786
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.785
Si034616m.g Setaria italica Si034616m.g I 0.785
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.781
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.776
OS07G0685700 Oryza sativa OS07G0685700 I 0.776
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.776
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.776
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.776
OBART07G26760 Oryza barthii OBART07G26760 I 0.766
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.761
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.761
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.752
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.751
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.749
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.745
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.740
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.737
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.736
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.732
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.732
Si029213m.g Setaria italica Si029213m.g I 0.729
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.724
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.723
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.721
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
Pm017011 Prunus mume Pm017011 I 0.720
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.720
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.720
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.720
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.717
Pm028171 Prunus mume Pm028171 I 0.715
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.713
PK19114.1 Cannabis sativa PK19114.1 I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.711
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.709
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.707
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.707
MDP0000562585 Malus domestica MDP0000562585 I 0.707
30169.m006395 Ricinus communis 30169.m006395 I 0.707
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.707
MDP0000565880 Malus domestica MDP0000565880 I 0.707
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.707
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.704
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.704
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.704
MDP0000490180 Malus domestica MDP0000490180 I 0.703
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.703
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.701
mgf020935m Mimulus guttatus mgf020935m I 0.700
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.700
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.700