PGSC0003DMG400029908 (Solanum tuberosum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 PGSC0003DMG400029908 T175198_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.822 0.822
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.822 0.822
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.765 0.765
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.737 0.737
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.713 0.713
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.713 0.713
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.704 0.704
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.704 0.704
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400076890 EIN3 40 287
PGSC0003DMT400076891 EIN3 35 282

Links

Other EIN3 family TFs
Other Solanum tuberosum TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.992
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.903
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.903
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.903
TCM_040510 Theobroma cacao TCM_040510 I 0.891
30169.m006395 Ricinus communis 30169.m006395 I 0.891
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.887
PK19114.1 Cannabis sativa PK19114.1 I 0.883
MDP0000490180 Malus domestica MDP0000490180 I 0.883
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.883
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.883
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.879
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.879
Ca_02669 Cicer arietinum Ca_02669 I 0.879
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.879
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.874
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.874
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.870
MDP0000565880 Malus domestica MDP0000565880 I 0.866
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.866
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.866
MDP0000562585 Malus domestica MDP0000562585 I 0.866
mgf020935m Mimulus guttatus mgf020935m I 0.862
Pm028171 Prunus mume Pm028171 I 0.858
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.858
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.858
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.858
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.854
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.850
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.850
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.842
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.842
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.838
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.838
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.826
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.826
EIL3 Arabidopsis thaliana AT1G73730 D 0.822
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.822
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.822
Bo6g118030 Brassica oleracea Bo6g118030 I 0.821
Bra015970 Brassica rapa Bra015970 I 0.818
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.814
Bo6g087550 Brassica oleracea Bo6g087550 I 0.810
Bra008110 Brassica rapa Bra008110 I 0.798
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.789
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.773
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.773
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.769
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.769
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.769
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.769
OBART09G14750 Oryza barthii OBART09G14750 I 0.769
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.769
OS09G0490200 Oryza sativa OS09G0490200 D 0.765
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.765
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.765
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.765
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.761
Si029259m.g Setaria italica Si029259m.g I 0.753
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.749
F775_17920 Aegilops tauschii F775_17920 I 0.749
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.749
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.749
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.749
OB09G21280 Oryza brachyantha OB09G21280 I 0.747
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.745
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.741
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.741
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.739
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.739
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.737
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.737
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.737
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.733
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.733
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.733
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.731
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.729
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.729
TCM_042022 Theobroma cacao TCM_042022 I 0.728
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.727
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.725
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.725
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.725
Si034616m.g Setaria italica Si034616m.g I 0.725
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.725
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.725
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.725
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.725
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.725
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.725
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.725
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.725
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.725
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.721
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.721
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.721
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.721
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.721
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.721
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.721
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.721
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.721
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.720
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.720
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.720
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.720
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.720
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.720
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.719
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.717
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.717
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.717
29708.m000185 Ricinus communis 29708.m000185 I 0.717
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.717
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.717
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.717
OB08G26880 Oryza brachyantha OB08G26880 I 0.717
Si013426m.g Setaria italica Si013426m.g I 0.717
Bra003831 Brassica rapa Bra003831 I 0.717
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.717
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.717
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.717
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.717
F775_28545 Aegilops tauschii F775_28545 I 0.717
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.717
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.715
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.715
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.713
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.713
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.713
OS03G0324200 Oryza sativa OS03G0324200 I 0.713
OS03G0324300 Oryza sativa OS03G0324300 I 0.713
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.713
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.713
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.713
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.713
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.713
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.713
PK13351.1 Cannabis sativa PK13351.1 I 0.713
EIL1 Arabidopsis thaliana AT2G27050 D 0.713
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.713
mgf015996m Mimulus guttatus mgf015996m I 0.713
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.713
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.713
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.713
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.711
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.711
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.711
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.711
Ca_07534 Cicer arietinum Ca_07534 I 0.711
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.711
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.709
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.709
MDP0000202831 Malus domestica MDP0000202831 I 0.709
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.709
MDP0000212881 Malus domestica MDP0000212881 I 0.709
MDP0000564884 Malus domestica MDP0000564884 I 0.709
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.709
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.709
Bra000528 Brassica rapa Bra000528 I 0.709
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.709
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.709
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.709
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.709
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.709
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.709
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.709
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.709
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.709
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.707
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.707
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.707
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.707
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.707
Pm017009 Prunus mume Pm017009 I 0.704
PK01239.1 Cannabis sativa PK01239.1 I 0.704
Ca_10236 Cicer arietinum Ca_10236 I 0.704
Bo3g041690 Brassica oleracea Bo3g041690 I 0.704
mgf018950m Mimulus guttatus mgf018950m I 0.704
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.704
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.704
OS08G0508700 Oryza sativa OS08G0508700 I 0.704
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.704
EIN3 Arabidopsis thaliana AT3G20770 D 0.704
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.704
MDP0000306498 Malus domestica MDP0000306498 I 0.704
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.704
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.704
OBART08G19960 Oryza barthii OBART08G19960 I 0.704
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.700
Bo1g108650 Brassica oleracea Bo1g108650 I 0.700
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.700
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.700
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.700