TCM_042022 (Theobroma cacao)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 TCM_042022 T175248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.935 0.935
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.931 0.931
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.931 0.931
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.931 0.931
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.915 0.915
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.866 0.866
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.715 0.715
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY34301 EIN3 48 295

Links

Other EIN3 family TFs
Other Theobroma cacao TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.980
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.976
29708.m000185 Ricinus communis 29708.m000185 I 0.972
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.967
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.967
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.963
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.963
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.959
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.955
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.955
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.951
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.951
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.951
Ca_10236 Cicer arietinum Ca_10236 I 0.951
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.951
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.951
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.947
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.947
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.947
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.943
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.943
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.943
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.939
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.939
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.935
EIN3 Arabidopsis thaliana AT3G20770 D 0.931
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.931
Ca_07534 Cicer arietinum Ca_07534 I 0.931
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.931
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.931
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.927
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.927
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.927
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.923
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.923
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.919
Bo5g106280 Brassica oleracea Bo5g106280 I 0.919
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.919
EIL1 Arabidopsis thaliana AT2G27050 D 0.915
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.911
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.911
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.911
Pm017009 Prunus mume Pm017009 I 0.911
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.911
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.906
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.906
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
mgf015996m Mimulus guttatus mgf015996m I 0.902
MDP0000202831 Malus domestica MDP0000202831 I 0.902
PK13351.1 Cannabis sativa PK13351.1 I 0.902
Bra000528 Brassica rapa Bra000528 I 0.898
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.898
PK01239.1 Cannabis sativa PK01239.1 I 0.898
mgf018950m Mimulus guttatus mgf018950m I 0.894
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.894
MDP0000212881 Malus domestica MDP0000212881 I 0.894
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.894
MDP0000306498 Malus domestica MDP0000306498 I 0.894
Bo1g108650 Brassica oleracea Bo1g108650 I 0.894
MDP0000564884 Malus domestica MDP0000564884 I 0.894
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.890
Bo3g041690 Brassica oleracea Bo3g041690 I 0.890
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.890
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.890
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.886
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.886
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.886
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.886
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.882
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.882
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.882
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.878
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.878
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.874
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.874
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.866
Bo3g076180 Brassica oleracea Bo3g076180 I 0.862
Bra001802 Brassica rapa Bra001802 I 0.862
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.858
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.846
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.846
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.841
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.829
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.825
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.825
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.825
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.825
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.825
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.825
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.825
OS03G0324300 Oryza sativa OS03G0324300 I 0.825
OS03G0324200 Oryza sativa OS03G0324200 I 0.825
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.825
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.821
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.821
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.821
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.821
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.817
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.817
mgf012394m Mimulus guttatus mgf012394m I 0.817
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.809
F775_28545 Aegilops tauschii F775_28545 I 0.809
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.809
Si034616m.g Setaria italica Si034616m.g I 0.809
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.809
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.809
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.805
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.797
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.797
OS07G0685700 Oryza sativa OS07G0685700 I 0.797
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.797
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.797
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.797
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.797
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.797
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.772
Si029213m.g Setaria italica Si029213m.g I 0.768
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.756
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.752
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.752
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.748
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.748
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.745
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.744
OBART07G26760 Oryza barthii OBART07G26760 I 0.744
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.740
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.733
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.732
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.732
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.732
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.732
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.728
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.728
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.728
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.724
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.724
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.724
30169.m006395 Ricinus communis 30169.m006395 I 0.724
Pm028171 Prunus mume Pm028171 I 0.724
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.724
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.724
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.724
PK19114.1 Cannabis sativa PK19114.1 I 0.724
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.721
MDP0000565880 Malus domestica MDP0000565880 I 0.720
MDP0000562585 Malus domestica MDP0000562585 I 0.720
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.720
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.720
MDP0000490180 Malus domestica MDP0000490180 I 0.720
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.715
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.715
EIL3 Arabidopsis thaliana AT1G73730 D 0.715
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.715
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.715
Bo6g087550 Brassica oleracea Bo6g087550 I 0.715
Ca_02669 Cicer arietinum Ca_02669 I 0.715
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.715
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.715
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.713
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.711
Bra015970 Brassica rapa Bra015970 I 0.711
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
TCM_040510 Theobroma cacao TCM_040510 I 0.711
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.711
Bo6g118030 Brassica oleracea Bo6g118030 I 0.711
mgf020935m Mimulus guttatus mgf020935m I 0.707
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.707
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.703
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.703