cassava3620.m1 (Manihot esculenta)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 cassava3620.m1 T175302_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.939 0.939
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.931 0.931
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.931 0.931
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.931 0.931
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.906 0.906
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.858 0.858
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.715 0.715
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava3620.m1 EIN3 22 269

Links

Other EIN3 family TFs
Other Manihot esculenta TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29708.m000185 Ricinus communis 29708.m000185 I 0.984
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.976
TCM_042022 Theobroma cacao TCM_042022 I 0.976
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.972
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.972
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.967
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.967
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.963
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.963
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.963
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.959
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.959
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.955
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.955
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.955
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.955
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.955
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.951
Ca_10236 Cicer arietinum Ca_10236 I 0.951
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.951
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.947
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.943
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.939
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.939
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.935
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.935
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.935
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.935
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.935
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.931
EIN3 Arabidopsis thaliana AT3G20770 D 0.931
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.931
Ca_07534 Cicer arietinum Ca_07534 I 0.931
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.927
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.923
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.923
Bo5g106280 Brassica oleracea Bo5g106280 I 0.919
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.919
Pm017009 Prunus mume Pm017009 I 0.919
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.919
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.919
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.915
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.915
MDP0000202831 Malus domestica MDP0000202831 I 0.911
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.911
PK13351.1 Cannabis sativa PK13351.1 I 0.906
PK01239.1 Cannabis sativa PK01239.1 I 0.906
EIL1 Arabidopsis thaliana AT2G27050 D 0.903
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.902
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.902
mgf018950m Mimulus guttatus mgf018950m I 0.902
MDP0000212881 Malus domestica MDP0000212881 I 0.902
MDP0000306498 Malus domestica MDP0000306498 I 0.902
MDP0000564884 Malus domestica MDP0000564884 I 0.902
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.898
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.898
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.898
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.898
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.894
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.894
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.894
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.894
Bra000528 Brassica rapa Bra000528 I 0.891
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.890
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.890
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.890
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.890
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.890
mgf015996m Mimulus guttatus mgf015996m I 0.884
Bo3g041690 Brassica oleracea Bo3g041690 I 0.883
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.878
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.878
Bo1g108650 Brassica oleracea Bo1g108650 I 0.876
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.874
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.874
Bo3g076180 Brassica oleracea Bo3g076180 I 0.866
Bra001802 Brassica rapa Bra001802 I 0.859
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.858
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.852
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.851
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.850
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.846
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.846
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.841
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.837
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.837
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.833
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.829
mgf012394m Mimulus guttatus mgf012394m I 0.829
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.825
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.821
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.821
OS03G0324300 Oryza sativa OS03G0324300 I 0.817
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.817
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.817
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.817
Si034616m.g Setaria italica Si034616m.g I 0.817
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.817
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.817
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.817
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.817
OS03G0324200 Oryza sativa OS03G0324200 I 0.817
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.813
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.813
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.809
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.809
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.809
F775_28545 Aegilops tauschii F775_28545 I 0.809
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.809
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.805
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.805
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.805
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.805
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.793
OS07G0685700 Oryza sativa OS07G0685700 I 0.793
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.793
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.793
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.793
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.793
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.793
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.773
OBART07G26760 Oryza barthii OBART07G26760 I 0.770
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.769
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.759
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.757
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.752
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.748
Si029213m.g Setaria italica Si029213m.g I 0.745
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.744
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.744
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.744
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.741
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.740
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.736
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.733
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.733
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.732
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.732
30169.m006395 Ricinus communis 30169.m006395 I 0.732
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.732
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.732
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.725
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.724
PK19114.1 Cannabis sativa PK19114.1 I 0.724
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.724
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.724
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.724
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.721
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.721
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.721
MDP0000565880 Malus domestica MDP0000565880 I 0.720
MDP0000562585 Malus domestica MDP0000562585 I 0.720
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.720
MDP0000490180 Malus domestica MDP0000490180 I 0.720
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.720
Pm028171 Prunus mume Pm028171 I 0.719
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.717
EIL3 Arabidopsis thaliana AT1G73730 D 0.715
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.715
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.715
TCM_040510 Theobroma cacao TCM_040510 I 0.715
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.715
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.715
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.713
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.713
Bo6g087550 Brassica oleracea Bo6g087550 I 0.713
Ca_02669 Cicer arietinum Ca_02669 I 0.713
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.711
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
mgf020935m Mimulus guttatus mgf020935m I 0.709
Bra008110 Brassica rapa Bra008110 I 0.708
Bo6g118030 Brassica oleracea Bo6g118030 I 0.707
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.704
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.703
Bra015970 Brassica rapa Bra015970 I 0.702