Carubv10020043m.g (Capsella rubella)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Carubv10020043m.g T175332_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.976 0.976
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.976 0.976
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN

NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.764 0.764
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.728 0.728
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10020043m EIN3 38 283

Links

Other EIN3 family TFs
Other Capsella rubella TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 1.000
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.992
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.984
EIL3 Arabidopsis thaliana AT1G73730 D 0.976
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.967
Bo6g118030 Brassica oleracea Bo6g118030 I 0.959
Bra008110 Brassica rapa Bra008110 I 0.951
Bra015970 Brassica rapa Bra015970 I 0.944
Bo6g087550 Brassica oleracea Bo6g087550 I 0.943
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.850
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.846
30169.m006395 Ricinus communis 30169.m006395 I 0.846
PK19114.1 Cannabis sativa PK19114.1 I 0.837
MDP0000490180 Malus domestica MDP0000490180 I 0.833
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.830
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.830
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.830
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.830
MDP0000562585 Malus domestica MDP0000562585 I 0.829
MDP0000565880 Malus domestica MDP0000565880 I 0.829
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.829
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.829
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.826
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.826
Bra003831 Brassica rapa Bra003831 I 0.826
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.825
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.822
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.821
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.821
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.821
Ca_02669 Cicer arietinum Ca_02669 I 0.818
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.817
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.817
TCM_040510 Theobroma cacao TCM_040510 I 0.817
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.813
Pm028171 Prunus mume Pm028171 I 0.811
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.810
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.809
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.805
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.802
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.802
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.801
mgf020935m Mimulus guttatus mgf020935m I 0.798
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.793
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.785
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.785
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.772
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.768
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.768
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.768
OBART09G14750 Oryza barthii OBART09G14750 I 0.768
Si029259m.g Setaria italica Si029259m.g I 0.764
OS09G0490200 Oryza sativa OS09G0490200 D 0.764
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.764
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.764
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.760
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.760
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.756
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.756
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.755
OB09G21280 Oryza brachyantha OB09G21280 I 0.755
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.749
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.748
F775_17920 Aegilops tauschii F775_17920 I 0.748
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.748
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.748
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.748
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.747
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.744
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.742
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.739
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.736
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.735
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.729
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.728
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.728
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.728
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.724
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.718
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.718
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.715
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.715
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.715
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.715
TCM_042022 Theobroma cacao TCM_042022 I 0.715
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.711
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.711
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.711
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.711
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.711
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.711
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.709
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.707
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.707
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.707
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.707
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.707
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.707
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.707
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.707
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.707
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.707
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.707
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.707
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.707
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.703
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.703
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.703
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.703
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.703
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.703
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.703
29708.m000185 Ricinus communis 29708.m000185 I 0.703
mgf018950m Mimulus guttatus mgf018950m I 0.703
Ca_10236 Cicer arietinum Ca_10236 I 0.703
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.703
Si034616m.g Setaria italica Si034616m.g I 0.703
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.703
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.703
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.700