Ciclev10014617m.g (Citrus clementina)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Ciclev10014617m.g T175337_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.923 0.923
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.923 0.923
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.923 0.923
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.894 0.894
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.854 0.854
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.703 0.703
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10014616m EIN3 49 296
Ciclev10014617m EIN3 49 296
Ciclev10014678m EIN3 24 271
Ciclev10014679m EIN3 24 271

Links

Other EIN3 family TFs
Other Citrus clementina TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 1.000
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.963
29708.m000185 Ricinus communis 29708.m000185 I 0.955
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.955
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.951
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.947
TCM_042022 Theobroma cacao TCM_042022 I 0.947
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.947
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.943
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.943
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.939
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.935
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.935
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.935
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.935
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.931
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.931
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.927
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.927
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.927
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.927
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.927
Ca_10236 Cicer arietinum Ca_10236 I 0.927
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.923
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.923
EIN3 Arabidopsis thaliana AT3G20770 D 0.923
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.919
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.919
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.919
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.919
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.915
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.915
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.911
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.911
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.911
Pm017009 Prunus mume Pm017009 I 0.906
Ca_07534 Cicer arietinum Ca_07534 I 0.906
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.906
Bo5g106280 Brassica oleracea Bo5g106280 I 0.903
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.898
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.898
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.898
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.894
MDP0000202831 Malus domestica MDP0000202831 I 0.894
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.891
EIL1 Arabidopsis thaliana AT2G27050 D 0.891
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.891
PK01239.1 Cannabis sativa PK01239.1 I 0.890
MDP0000212881 Malus domestica MDP0000212881 I 0.890
MDP0000564884 Malus domestica MDP0000564884 I 0.890
PK13351.1 Cannabis sativa PK13351.1 I 0.890
mgf018950m Mimulus guttatus mgf018950m I 0.888
MDP0000306498 Malus domestica MDP0000306498 I 0.886
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.886
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.886
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.886
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.882
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.882
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.882
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.882
mgf015996m Mimulus guttatus mgf015996m I 0.880
Bra000528 Brassica rapa Bra000528 I 0.879
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.878
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.878
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.878
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.878
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.878
Bo1g108650 Brassica oleracea Bo1g108650 I 0.876
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.874
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.874
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.874
Bo3g041690 Brassica oleracea Bo3g041690 I 0.871
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.870
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.866
Bo3g076180 Brassica oleracea Bo3g076180 I 0.862
Bra001802 Brassica rapa Bra001802 I 0.855
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.854
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.852
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.852
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.846
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.833
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.831
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.829
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.821
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.821
mgf012394m Mimulus guttatus mgf012394m I 0.817
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.815
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.810
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.809
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.809
OS03G0324200 Oryza sativa OS03G0324200 I 0.809
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.809
F775_28545 Aegilops tauschii F775_28545 I 0.809
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.809
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.809
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.809
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.809
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.809
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.809
OS03G0324300 Oryza sativa OS03G0324300 I 0.809
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.809
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.809
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.801
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.801
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.801
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.797
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.793
Si034616m.g Setaria italica Si034616m.g I 0.793
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.793
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.793
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.789
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.787
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.785
OS07G0685700 Oryza sativa OS07G0685700 I 0.785
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.785
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.785
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.785
OBART07G26760 Oryza barthii OBART07G26760 I 0.770
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.769
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.769
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.757
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.749
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.747
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.744
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.743
Si029213m.g Setaria italica Si029213m.g I 0.737
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.736
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.736
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.736
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.729
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.728
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.728
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.722
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.721
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.721
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.720
30169.m006395 Ricinus communis 30169.m006395 I 0.720
PK19114.1 Cannabis sativa PK19114.1 I 0.720
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.718
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.717
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.715
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.715
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.713
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.711
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.711
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.709
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.709
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.709
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.707
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
Bo6g118030 Brassica oleracea Bo6g118030 I 0.707
MDP0000490180 Malus domestica MDP0000490180 I 0.707
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.707
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.707
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.707
MDP0000562585 Malus domestica MDP0000562585 I 0.707
Pm028171 Prunus mume Pm028171 I 0.707
MDP0000565880 Malus domestica MDP0000565880 I 0.707
Bo6g087550 Brassica oleracea Bo6g087550 I 0.705
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.704
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.704
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.704
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.703
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
TCM_040510 Theobroma cacao TCM_040510 I 0.703
Bra015970 Brassica rapa Bra015970 I 0.702
Ca_02669 Cicer arietinum Ca_02669 I 0.700
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.700