gene00392-v1.0-hybrid (Fragaria vesca)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 gene00392-v1.0-hybrid T175350_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.832 0.832
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.832 0.832
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.804 0.804
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.804 0.804
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.804 0.804
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.785 0.785
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.729 0.729
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna00392.1-v1.0-hybrid EIN3 42 148

Links

Other EIN3 family TFs
Other Fragaria vesca TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.850
29708.m000185 Ricinus communis 29708.m000185 I 0.841
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.841
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.841
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.832
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.832
Ca_10236 Cicer arietinum Ca_10236 I 0.832
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.822
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.822
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.813
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.804
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.785
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.785
Bo3g076180 Brassica oleracea Bo3g076180 I 0.766
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.766
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.757
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.757
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.757
mgf012394m Mimulus guttatus mgf012394m I 0.748
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.738
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.730
MDP0000565880 Malus domestica MDP0000565880 I 0.720
MDP0000562585 Malus domestica MDP0000562585 I 0.720
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.710
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.710
TCM_040510 Theobroma cacao TCM_040510 I 0.701
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.701
OS07G0685700 Oryza sativa OS07G0685700 I 0.701
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.701
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.701
30169.m006395 Ricinus communis 30169.m006395 I 0.701
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.701
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.701