Gorai.013G250300 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.013G250300 T175363_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.750 0.750
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.750 0.750
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN

NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G250300.1 EIN3 38 282
Gorai.013G250300.2 EIN3 14 258

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_17920 Aegilops tauschii F775_17920 I 0.721
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.727
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.762
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.740
EIL3 Arabidopsis thaliana AT1G73730 D 0.744
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.742
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.705
Bo6g087550 Brassica oleracea Bo6g087550 I 0.742
Bo6g118030 Brassica oleracea Bo6g118030 I 0.744
Bra015970 Brassica rapa Bra015970 I 0.738
Bra008110 Brassica rapa Bra008110 I 0.749
PK19114.1 Cannabis sativa PK19114.1 I 0.781
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.736
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.736
Ca_02669 Cicer arietinum Ca_02669 I 0.769
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.789
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.789
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.807
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.789
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.740
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.789
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.769
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.757
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.794
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.791
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.715
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.779
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.773
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.777
MDP0000490180 Malus domestica MDP0000490180 I 0.795
MDP0000562585 Malus domestica MDP0000562585 I 0.795
MDP0000565880 Malus domestica MDP0000565880 I 0.795
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.736
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.798
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.766
mgf020935m Mimulus guttatus mgf020935m I 0.733
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.709
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.730
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.715
OBART09G14750 Oryza barthii OBART09G14750 I 0.717
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.717
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.717
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.717
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.709
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.709
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.706
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.777
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.708
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.783
Pm028171 Prunus mume Pm028171 I 0.787
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.807
30169.m006395 Ricinus communis 30169.m006395 I 0.791
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.769
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.773
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.762
Si029259m.g Setaria italica Si029259m.g I 0.721
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.725
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.754
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.749
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.725
TCM_040510 Theobroma cacao TCM_040510 I 0.811
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.721
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.769
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.717
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.779