MDP0000244873 (Malus domestica)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 MDP0000244873 T175375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.868 0.868
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.842 0.842
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.842 0.842
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.816 0.816
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN

NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.816 0.816
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.816 0.816
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.789 0.789
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.789 0.789
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000244873 EIN3 1 38

Links

Other EIN3 family TFs
Other Malus domestica TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.816
29708.m000185 Ricinus communis 29708.m000185 I 0.816
Bo3g076180 Brassica oleracea Bo3g076180 I 0.763
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.737
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.737
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.737
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.737