orange1.1g009144m.g (Citrus sinensis)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 orange1.1g009144m.g T175388_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.774 0.774
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.874 0.874
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.874 0.874
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.874 0.874
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.785 0.785
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.833 0.833
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.703 0.703
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009140m EIN3 47 294
orange1.1g009144m EIN3 47 294
orange1.1g016498m EIN3 61 140
orange1.1g016500m EIN3 61 140
orange1.1g016840m EIN3 47 181

Links

Other EIN3 family TFs
Other Citrus sinensis TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 1.000
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.935
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.935
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.931
Pm017009 Prunus mume Pm017009 I 0.931
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.931
MDP0000306498 Malus domestica MDP0000306498 I 0.927
MDP0000202831 Malus domestica MDP0000202831 I 0.923
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.923
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.919
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.919
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.915
PK13351.1 Cannabis sativa PK13351.1 I 0.911
29708.m000185 Ricinus communis 29708.m000185 I 0.911
MDP0000564884 Malus domestica MDP0000564884 I 0.906
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.906
MDP0000212881 Malus domestica MDP0000212881 I 0.906
PK01239.1 Cannabis sativa PK01239.1 I 0.906
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.906
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.898
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.894
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.894
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.894
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.890
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.890
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.890
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.890
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.890
TCM_042022 Theobroma cacao TCM_042022 I 0.890
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.890
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.886
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.886
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.886
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.882
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.882
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.882
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.882
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.882
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.882
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.878
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.878
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.878
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.878
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.878
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.878
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.878
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.874
Ca_10236 Cicer arietinum Ca_10236 I 0.874
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.874
EIN3 Arabidopsis thaliana AT3G20770 D 0.874
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.874
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.874
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.874
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.874
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.870
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.870
Ca_07534 Cicer arietinum Ca_07534 I 0.870
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.870
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.866
Bo5g106280 Brassica oleracea Bo5g106280 I 0.863
EIL1 Arabidopsis thaliana AT2G27050 D 0.862
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.862
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.862
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.862
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.862
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.862
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.858
mgf018950m Mimulus guttatus mgf018950m I 0.858
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.858
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.858
Bra000528 Brassica rapa Bra000528 I 0.858
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.858
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.854
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.854
Bo3g041690 Brassica oleracea Bo3g041690 I 0.850
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.850
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.846
mgf015996m Mimulus guttatus mgf015996m I 0.846
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.846
Bo1g108650 Brassica oleracea Bo1g108650 I 0.841
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.841
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.837
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.837
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.837
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.833
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.833
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.833
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.833
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.833
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.833
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.833
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.833
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.833
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.833
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.829
Si034616m.g Setaria italica Si034616m.g I 0.829
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.829
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.825
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.825
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.825
F775_28545 Aegilops tauschii F775_28545 I 0.821
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.821
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.821
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.821
Bra001802 Brassica rapa Bra001802 I 0.821
OS03G0324200 Oryza sativa OS03G0324200 I 0.817
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.817
OS03G0324300 Oryza sativa OS03G0324300 I 0.817
Bo3g076180 Brassica oleracea Bo3g076180 I 0.817
mgf012394m Mimulus guttatus mgf012394m I 0.817
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.817
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.809
OS07G0685700 Oryza sativa OS07G0685700 I 0.805
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.805
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.805
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.805
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.805
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.801
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.801
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.801
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.788
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.785
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.776
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.772
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.764
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.760
Bra035746 Brassica rapa Bra035746 I 0.752
Cla011250 Citrullus lanatus Cla011250 I 0.752
Pm017011 Prunus mume Pm017011 I 0.752
Si029213m.g Setaria italica Si029213m.g I 0.749
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.748
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.748
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.748
OBART07G26760 Oryza barthii OBART07G26760 I 0.748
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.744
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.744
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.740
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.740
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.737
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.734
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.724
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.724
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.723
Bra023927 Brassica rapa Bra023927 I 0.722
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.720
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.720
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.720
30169.m006395 Ricinus communis 30169.m006395 I 0.720
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.715
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.715
Pm028171 Prunus mume Pm028171 I 0.715
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.711
PK19114.1 Cannabis sativa PK19114.1 I 0.711
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.711
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.711
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.711
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.709
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.709
MDP0000490180 Malus domestica MDP0000490180 I 0.707
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.707
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.707
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.707
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.707
MDP0000562585 Malus domestica MDP0000562585 I 0.707
TCM_040510 Theobroma cacao TCM_040510 I 0.707
MDP0000565880 Malus domestica MDP0000565880 I 0.707
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
Ca_02669 Cicer arietinum Ca_02669 I 0.703
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.703
mgf020935m Mimulus guttatus mgf020935m I 0.700