Pavir.Bb03705 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.Bb03705 T175392_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.733 0.733
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.729 0.729
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.721 0.721
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.721 0.721
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.721 0.721
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.713 0.713
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03705.1.p EIN3 62 315

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.921
Si029213m.g Setaria italica Si029213m.g I 0.869
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.848
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.837
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.833
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.828
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.825
OS07G0685700 Oryza sativa OS07G0685700 I 0.825
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.825
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.825
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.825
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.825
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.823
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.805
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.805
OBART07G26760 Oryza barthii OBART07G26760 I 0.804
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.786
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.777
OB07G32250 Oryza brachyantha OB07G32250 I 0.775
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.774
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.769
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.765
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.765
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.765
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.765
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.765
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.765
F775_28545 Aegilops tauschii F775_28545 I 0.765
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.765
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.765
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.765
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.761
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.761
Si034616m.g Setaria italica Si034616m.g I 0.761
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.758
OS03G0324300 Oryza sativa OS03G0324300 I 0.757
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.757
OS03G0324200 Oryza sativa OS03G0324200 I 0.757
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.757
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.757
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.757
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.757
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.757
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.757
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.756
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.752
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.752
PK01239.1 Cannabis sativa PK01239.1 I 0.752
TCM_042022 Theobroma cacao TCM_042022 I 0.752
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.748
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.748
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.748
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.748
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.748
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.748
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.748
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.748
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.748
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.746
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.746
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.746
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.746
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.745
EIL1 Arabidopsis thaliana AT2G27050 D 0.745
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.744
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.744
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.744
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.744
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.741
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.741
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.741
PK13351.1 Cannabis sativa PK13351.1 I 0.740
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.740
Ca_07534 Cicer arietinum Ca_07534 I 0.740
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.740
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.740
Bra000528 Brassica rapa Bra000528 I 0.738
Bo5g106280 Brassica oleracea Bo5g106280 I 0.738
MDP0000202831 Malus domestica MDP0000202831 I 0.736
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.736
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.736
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.736
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.736
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.736
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.736
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.736
Pm017009 Prunus mume Pm017009 I 0.736
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.736
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.736
EIN3 Arabidopsis thaliana AT3G20770 D 0.736
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.736
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.736
Bo3g041690 Brassica oleracea Bo3g041690 I 0.734
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.733
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.732
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.732
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.732
MDP0000212881 Malus domestica MDP0000212881 I 0.732
MDP0000564884 Malus domestica MDP0000564884 I 0.732
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.732
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.730
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.729
29708.m000185 Ricinus communis 29708.m000185 I 0.729
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.729
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.729
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.728
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.728
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.725
MDP0000306498 Malus domestica MDP0000306498 I 0.725
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.724
Bo1g108650 Brassica oleracea Bo1g108650 I 0.721
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.721
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.721
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.721
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.720
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.717
Ca_10236 Cicer arietinum Ca_10236 I 0.717
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.717
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.717
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.715
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.713
mgf018950m Mimulus guttatus mgf018950m I 0.713
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.713
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.711
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.709
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.705
mgf012394m Mimulus guttatus mgf012394m I 0.705
Bo3g076180 Brassica oleracea Bo3g076180 I 0.705
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.705
Bra001802 Brassica rapa Bra001802 I 0.703
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.703
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.701
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.700