CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Fb01951
(
Panicum virgatum
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
Pavir.Fb01951
T175394_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN
NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.805
0.805
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.703
0.703
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.703
0.703
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb01951.1.p
EIN3
38
283
EELARRMWKDKIKLKRIKERQQKLALQQSESVKSKTKKISDQALRKKMARAQNGILKYMLKLVEVCNARGFVYGIIPEKGKPVGGASENIRAWWKEKVKFDKNGPAAIAKYELENSMLSKSNGTKNQHSLMLQDATLGSLLSALMQHCSPQQRRYPLDKGVPPPWWPSGNEAWWTALGLPKGEGPPYKKPHDLKKAWKAGVLMGVIKHMAPNFDKIRDHVRKSKCLQDKMTAKESLIWLGVLQREE
Pavir.Fb01951.2.p
EIN3
38
283
EELARRMWKDKIKLKRIKERQQKLALQQSESVKSKTKKISDQALRKKMARAQNGILKYMLKLVEVCNARGFVYGIIPEKGKPVGGASENIRAWWKEKVKFDKNGPAAIAKYELENSMLSKSNGTKNQHSLMLQDATLGSLLSALMQHCSPQQRRYPLDKGVPPPWWPSGNEAWWTALGLPKGEGPPYKKPHDLKKAWKAGVLMGVIKHMAPNFDKIRDHVRKSKCLQDKMTAKESLIWLGVLQREE
Pavir.Fb01951.3.p
EIN3
38
283
EELARRMWKDKIKLKRIKERQQKLALQQSESVKSKTKKISDQALRKKMARAQNGILKYMLKLVEVCNARGFVYGIIPEKGKPVGGASENIRAWWKEKVKFDKNGPAAIAKYELENSMLSKSNGTKNQHSLMLQDATLGSLLSALMQHCSPQQRRYPLDKGVPPPWWPSGNEAWWTALGLPKGEGPPYKKPHDLKKAWKAGVLMGVIKHMAPNFDKIRDHVRKSKCLQDKMTAKESLIWLGVLQREE
Links
Other
EIN3
family TFs
Other
Panicum virgatum
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy