Pavir.Fb01951 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.Fb01951 T175394_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN

NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.805 0.805
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.703 0.703
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01951.1.p EIN3 38 283
Pavir.Fb01951.2.p EIN3 38 283
Pavir.Fb01951.3.p EIN3 38 283

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_17920 Aegilops tauschii F775_17920 I 0.809
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.722
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.724
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.707
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.807
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.837
PK19114.1 Cannabis sativa PK19114.1 I 0.725
Ca_02669 Cicer arietinum Ca_02669 I 0.713
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.741
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.741
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.736
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.721
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.703
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.729
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.717
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.717
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.709
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.711
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.827
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.799
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.847
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.799
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.733
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.724
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.721
MDP0000565880 Malus domestica MDP0000565880 I 0.728
MDP0000562585 Malus domestica MDP0000562585 I 0.728
MDP0000490180 Malus domestica MDP0000490180 I 0.729
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.725
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.724
mgf020935m Mimulus guttatus mgf020935m I 0.737
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.748
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.772
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.768
OBART08G19960 Oryza barthii OBART08G19960 I 0.835
OBART09G14750 Oryza barthii OBART09G14750 I 0.809
OB09G21280 Oryza brachyantha OB09G21280 I 0.795
OB08G26880 Oryza brachyantha OB08G26880 I 0.835
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.809
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.827
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.809
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.792
BGIOSGA026709 Oryza indica BGIOSGA026709 I 0.780
OLONG_023247 Oryza longistaminata OLONG_023247 N 0.725
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.792
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.831
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.809
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.827
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.827
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.805
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.792
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.827
OS08G0508700 Oryza sativa OS08G0508700 I 0.827
OS09G0490200 Oryza sativa OS09G0490200 D 0.792
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.964
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.813
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.795
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.770
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.728
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.717
Pm028171 Prunus mume Pm028171 I 0.727
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.732
30169.m006395 Ricinus communis 30169.m006395 I 0.736
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.721
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.725
Si013426m.g Setaria italica Si013426m.g I 0.898
Si029259m.g Setaria italica Si029259m.g I 0.815
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.720
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.713
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.799
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.867
TCM_040510 Theobroma cacao TCM_040510 I 0.740
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.850
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.839
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.839
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.821
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.813
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.805
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.704
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.850
TRIUR3_08597 Triticum urartu TRIUR3_08597 I 0.707
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.732
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.805
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.859