chr3.LjB09K03.50.nc (Lotus japonicus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 chr3.LjB09K03.50.nc T175419_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.818 0.818
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.818 0.818
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN

NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.806 0.806
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.729 0.729
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.725 0.725
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.709 0.709
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.709 0.709
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.709 0.709
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.LjB09K03.50.nc EIN3 40 287

Links

Other EIN3 family TFs
Other Lotus japonicus TFs

206 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29708.m000185 Ricinus communis 29708.m000185 I 0.717
30169.m006395 Ricinus communis 30169.m006395 I 0.919
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.715
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.789
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.737
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.850
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.724
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.717
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.806
Bo3g041690 Brassica oleracea Bo3g041690 I 0.710
Bo5g106280 Brassica oleracea Bo5g106280 I 0.710
Bo6g087550 Brassica oleracea Bo6g087550 I 0.811
Bo6g118030 Brassica oleracea Bo6g118030 I 0.821
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.711
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.709
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.806
Bra000528 Brassica rapa Bra000528 I 0.710
Bra003831 Brassica rapa Bra003831 I 0.723
Bra008110 Brassica rapa Bra008110 I 0.811
Bra015970 Brassica rapa Bra015970 I 0.819
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.717
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.709
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.757
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.821
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.711
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.713
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.711
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.821
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.713
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.895
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.854
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.732
Ca_02669 Cicer arietinum Ca_02669 I 0.964
Ca_07534 Cicer arietinum Ca_07534 I 0.711
Ca_10236 Cicer arietinum Ca_10236 I 0.704
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.717
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.720
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.724
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.717
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.935
Cla006390 Citrullus lanatus Cla006390 I 0.813
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.715
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.907
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.724
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.717
EIL1 Arabidopsis thaliana AT2G27050 D 0.709
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.891
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.822
EIL3 Arabidopsis thaliana AT1G73730 D 0.821
EIN3 Arabidopsis thaliana AT3G20770 D 0.709
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.715
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.891
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.717
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.728
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.729
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.729
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.728
F775_17920 Aegilops tauschii F775_17920 I 0.773
F775_28545 Aegilops tauschii F775_28545 I 0.713
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.720
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.919
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.704
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.711
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.713
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.709
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.939
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.713
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.955
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.715
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.720
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.704
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.866
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.717
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.874
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.777
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.700
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.745
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.717
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.725
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.709
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.713
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.802
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.717
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.706
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.700
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.785
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.789
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.725
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.727
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.763
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.879
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.862
MDP0000202831 Malus domestica MDP0000202831 I 0.732
MDP0000212881 Malus domestica MDP0000212881 I 0.724
MDP0000306498 Malus domestica MDP0000306498 I 0.717
MDP0000490180 Malus domestica MDP0000490180 I 0.915
MDP0000562585 Malus domestica MDP0000562585 I 0.911
MDP0000564884 Malus domestica MDP0000564884 I 0.724
MDP0000565880 Malus domestica MDP0000565880 I 0.911
mgf012394m Mimulus guttatus mgf012394m I 0.704
mgf018950m Mimulus guttatus mgf018950m I 0.713
mgf020935m Mimulus guttatus mgf020935m I 0.846
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.731
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.767
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.713
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.943
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.711
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.709
OB08G26880 Oryza brachyantha OB08G26880 I 0.737
OB09G21280 Oryza brachyantha OB09G21280 I 0.767
OBART08G19960 Oryza barthii OBART08G19960 I 0.719
OBART09G14750 Oryza barthii OBART09G14750 I 0.810
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.717
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.729
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.810
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.723
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.717
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.725
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.796
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.717
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.810
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.719
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.717
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.719
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.802
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.717
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.724
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.935
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.720
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.717
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.810
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.717
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.719
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.806
OS03G0324200 Oryza sativa OS03G0324200 I 0.717
OS03G0324300 Oryza sativa OS03G0324300 I 0.717
OS08G0508700 Oryza sativa OS08G0508700 I 0.719
OS09G0490200 Oryza sativa OS09G0490200 D 0.806
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.719
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.721
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.717
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.733
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.751
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.757
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.782
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.726
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.711
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.732
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.717
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.826
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.721
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.870
PK01239.1 Cannabis sativa PK01239.1 I 0.717
PK13351.1 Cannabis sativa PK13351.1 I 0.729
PK19114.1 Cannabis sativa PK19114.1 I 0.923
Pm017009 Prunus mume Pm017009 I 0.720
Pm028171 Prunus mume Pm028171 I 0.912
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.935
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.767
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.919
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.711
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.709
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.715
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.709
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.927
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.721
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.729
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.915
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.715
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.709
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.704
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.724
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.935
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.717
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.739
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.715
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.739
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.739
Si013426m.g Setaria italica Si013426m.g I 0.729
Si029259m.g Setaria italica Si029259m.g I 0.769
Si034616m.g Setaria italica Si034616m.g I 0.721
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.830
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.715
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.866
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.724
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.732
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.709
TCM_040510 Theobroma cacao TCM_040510 I 0.895
TCM_042022 Theobroma cacao TCM_042022 I 0.724
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.713
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.825
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.707
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.713
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.739
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.729
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.769
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.773
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.821
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.729
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.731
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.731
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.729
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.709
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.732