LjSGA_055593.1 (Lotus japonicus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 LjSGA_055593.1 T175424_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.724 0.724
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.711 0.711
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_055593.1 EIN3 1 76

Links

Other EIN3 family TFs
Other Lotus japonicus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr4.CM0307.140.nc Lotus japonicus chr4.CM0307.140.nc N 0.855
evm.TU.supercontig_20.234 Carica papaya evm.TU.supercontig_20.234 N 0.776
Gorai.007G241000 Gossypium raimondii Gorai.007G241000 N 0.763
Bostr.0568s0282 Boechera stricta Bostr.0568s0282 N 0.750
mgf019810m Mimulus guttatus mgf019810m N 0.750
Bra028601 Brassica rapa Bra028601 N 0.750
Bo2g009710 Brassica oleracea Bo2g009710 N 0.750
fgenesh2_kg.6__972__AT5G10120.1 Arabidopsis lyrata fgenesh2_kg.6__972__AT5G10120.1 N 0.737
Carubv10000964m.g Capsella rubella Carubv10000964m.g N 0.737
Thhalv10015634m.g Eutrema salsugineum Thhalv10015634m.g N 0.737
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.737
Cla002427 Citrullus lanatus Cla002427 N 0.724
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.724
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.724
Solyc03g096630.1 Solanum lycopersicum Solyc03g096630.1 N 0.724
PGSC0003DMG400020621 Solanum tuberosum PGSC0003DMG400020621 N 0.724
mgf023622m Mimulus guttatus mgf023622m N 0.724
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.724
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.724
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.711
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.711
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.711
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.711
Ca_10236 Cicer arietinum Ca_10236 I 0.711
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.711
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.711
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.711
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.711
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.711
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.711
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.711
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.711
29708.m000185 Ricinus communis 29708.m000185 I 0.711
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.711
OS07G0685700 Oryza sativa OS07G0685700 I 0.711
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.711
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.711