LjSGA_067101.1 (Lotus japonicus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 LjSGA_067101.1 T175426_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT

ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.925 0.925
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN

NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.882 0.882
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH

DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.882 0.882
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR

YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.882 0.882
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN

NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.876 0.876
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN

NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.857 0.857
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN

NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.721 0.721
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH

DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_067101.1 EIN3 3 165

Links

Other EIN3 family TFs
Other Lotus japonicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29708.m000185 Ricinus communis 29708.m000185 I 0.938
30169.m006395 Ricinus communis 30169.m006395 I 0.708
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.776
Bo3g076180 Brassica oleracea Bo3g076180 I 0.839
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.870
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.727
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.807
Ca_10236 Cicer arietinum Ca_10236 I 0.957
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.938
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.702
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.708
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.863
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.925
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.826
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.857
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.932
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.950
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.932
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.932
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.708
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.820
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.826
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.832
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.721
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.714
MDP0000562585 Malus domestica MDP0000562585 I 0.714
MDP0000565880 Malus domestica MDP0000565880 I 0.714
mgf012394m Mimulus guttatus mgf012394m I 0.789
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.714
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.932
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.776
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.785
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.776
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.776
OS07G0685700 Oryza sativa OS07G0685700 I 0.776
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.814
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.733
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.702
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.702
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.857
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.901
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.702
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.702
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.841
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.794
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.708
TCM_040510 Theobroma cacao TCM_040510 I 0.708
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.882
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.718
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711