CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Elk1
(
Dipodomys ordii
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00178 (Ets)
IPR000418
ENSDORG00000001022
T175969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Elk1
M01483_2.00
Mus musculus
NNCCGGAARY
RYTTCCGGNN
PBM
Wei et al.(2010)
Elk1
0.795
0.653
ELK1
M02979_2.00
Homo sapiens
DCCGGAAGTN
NACTTCCGGH
SELEX
Jolma et al.(2013)
ELK1_1
0.795
0.653
ELK1
M02980_2.00
Homo sapiens
ACCGGAAGTD
HACTTCCGGT
SELEX
Jolma et al.(2013)
ELK1_2
0.795
0.653
ELK1
M02981_2.00
Homo sapiens
NRYTTCCGSCGGAAGTN
NACTTCCGSCGGAARYN
SELEX
Jolma et al.(2013)
ELK1_3
0.795
0.653
ELK1
M02982_2.00
Homo sapiens
RCCGGAAGTN
NACTTCCGGY
SELEX
Jolma et al.(2013)
ELK1_4
0.795
0.653
ELK1
M04752_2.00
Homo sapiens
NRCCGGAAGTN
NACTTCCGGYN
SELEX
Yin et al.(2017)
ELK1_eDBD_HT-SELEX
0.795
0.653
ELK1
M04754_2.00
Homo sapiens
NDSCGGAWGYN
NRCWTCCGSHN
SELEX
Yin et al.(2017)
ELK1_FL_HT-SELEX
0.795
0.653
ELK1
M09051_2.00
Homo sapiens
RCCGGAAGTGV
BCACTTCCGGY
Misc
Kulakovskiy et al.(2013)
ELK1_HUMAN.H11MO.0.B
0.795
0.653
Elk1
M09070_2.00
Mus musculus
VCCGGAAGTDV
BHACTTCCGGB
Misc
Kulakovskiy et al.(2013)
ELK1_MOUSE.H11MO.0.B
0.795
0.653
ELK1
M09531_2.00
Homo sapiens
NSCGGAAVNN
NNBTTCCGSN
Misc
Heinz et al.(2010)
Hela-Elk1_GSE31477
0.795
0.653
ELK1
M10488_2.00
Homo sapiens
NNNDMCGGAARBNN
NNVYTTCCGKHNNN
Transfac
Matys et al.(2006)
V$ELK1_02
0.795
0.653
ELK1
M10489_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELK1_03
0.795
0.653
ELK1
M10490_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELK1_04
0.795
0.653
ELK1
M10491_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELK1_Q4
0.795
0.653
ELK1
M10492_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELK1_Q6
0.795
0.653
ELK1
M04753_2.00
Homo sapiens
NRCMGGAWGYN
NRCWTCCKGYN
SELEX
Yin et al.(2017)
ELK1_eDBD_Methyl-HT-SELEX
0.795
0.653
ELK1
M04755_2.00
Homo sapiens
NRVMGGAWVBN
NVBWTCCKBYN
SELEX
Yin et al.(2017)
ELK1_FL_Methyl-HT-SELEX
0.795
0.653
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000000960
Ets
17
89
TLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKKTNMNYDKLSRALRYYYDKVWPLRPWLG
ENSDORP00000000960
Ets
91
116
EICIRNFIFLNIIRKVSGQKFVYKFV
Links
Other
Ets
family TFs
Other
Dipodomys ordii
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy