CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG000956.1
(
Alligator sinensis
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
Alligator_sinensis_CCG000956.1
T177672_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Etv5
M01485_2.00
Mus musculus
DSCGGAWRY
RYWTCCGSH
PBM
Wei et al.(2010)
Etv5
0.838
0.864
ETV5
M03007_2.00
Homo sapiens
DVCGGAWRYN
NRYWTCCGBH
SELEX
Jolma et al.(2013)
ETV5_1
0.838
0.864
ETV5
M04800_2.00
Homo sapiens
NDSCGGAWRBN
NVYWTCCGSHN
SELEX
Yin et al.(2017)
ETV5_eDBD_HT-SELEX
0.838
0.864
ETV5
M09063_2.00
Homo sapiens
VRRVAGGAARDDRN
NYHHYTTCCTBYYB
Misc
Kulakovskiy et al.(2013)
ETV5_HUMAN.H11MO.0.C
0.838
0.864
ETV5
M04801_2.00
Homo sapiens
RSMGGAAGGAWGYD
HRCWTCCTTCCKSY
SELEX
Yin et al.(2017)
ETV5_eDBD_Methyl-HT-SELEX_1
0.838
0.864
ETV5
M04802_2.00
Homo sapiens
NRSMGGAWGBN
NVCWTCCKSYN
SELEX
Yin et al.(2017)
ETV5_eDBD_Methyl-HT-SELEX_2
0.838
0.864
Etv4
M01487_2.00
Mus musculus
NDSCGGAWRY
RYWTCCGSHN
PBM
Wei et al.(2010)
Etv4
0.837
0.818
ETV4
M03006_2.00
Homo sapiens
DCCGGAWRYN
NRYWTCCGGH
SELEX
Jolma et al.(2013)
ETV4_1
0.837
0.818
ETV4
M04793_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_eDBD_HT-SELEX
0.837
0.818
ETV4
M04796_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_FL_HT-SELEX_1
0.837
0.818
ETV4
M04797_2.00
Homo sapiens
VTCGTAAATGCH
DGCATTTACGAB
SELEX
Yin et al.(2017)
ETV4_FL_HT-SELEX_2
0.837
0.818
ETV4
M09062_2.00
Homo sapiens
VNSAGGAARNN
NNYTTCCTSNB
Misc
Kulakovskiy et al.(2013)
ETV4_HUMAN.H11MO.0.B
0.837
0.818
Etv4
M09073_2.00
Mus musculus
VMGGAARB
VYTTCCKB
Misc
Kulakovskiy et al.(2013)
ETV4_MOUSE.H11MO.0.B
0.837
0.818
ETV4
M10517_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PEA3_Q6_02
0.837
0.818
ETV4
M10518_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PEA3_Q6
0.837
0.818
ETV4
M04794_2.00
Homo sapiens
RSMGGAAGGAWRYN
NRYWTCCTTCCKSY
SELEX
Yin et al.(2017)
ETV4_eDBD_Methyl-HT-SELEX_1
0.837
0.818
ETV4
M04795_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_eDBD_Methyl-HT-SELEX_2
0.837
0.818
ETV4
M04798_2.00
Homo sapiens
RCMGGAAGKAWGYN
NRCWTMCTTCCKGY
SELEX
Yin et al.(2017)
ETV4_FL_Methyl-HT-SELEX_1
0.837
0.818
ETV4
M04799_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_FL_Methyl-HT-SELEX_2
0.837
0.818
Etv1
M01478_2.00
Mus musculus
NNSCGGAWVH
DBWTCCGSNN
PBM
Wei et al.(2010)
Etv1
0.822
0.795
Etv1
M01479_2.00
Mus musculus
NDCCGGAWRY
RYWTCCGGHN
PBM
Wei et al.(2010)
Gm5454
0.822
0.795
ETV1
M02964_2.00
Homo sapiens
RCCGGAWRYN
NRYWTCCGGY
SELEX
Jolma et al.(2013)
ETV1_1
0.822
0.795
ETV1
M04708_2.00
Homo sapiens
NDVCGGAWRYN
NRYWTCCGBHN
SELEX
Yin et al.(2017)
ETV1_eDBD_HT-SELEX
0.822
0.795
ETV1
M04710_2.00
Homo sapiens
NRCCGGAAGYD
HRCTTCCGGYN
SELEX
Yin et al.(2017)
ETV1_FL_HT-SELEX
0.822
0.795
ETV1
M09046_2.00
Homo sapiens
VNCCGGAAGBN
NVCTTCCGGNB
Misc
Kulakovskiy et al.(2013)
ETV1_HUMAN.H11MO.0.A
0.822
0.795
ETV1
M09528_2.00
Homo sapiens
NRCMGGAAGY
RCTTCCKGYN
Misc
Heinz et al.(2010)
GIST48-ETV1_GSE22441
0.822
0.795
ETV1
M04709_2.00
Homo sapiens
NRSMGGAWRBN
NVYWTCCKSYN
SELEX
Yin et al.(2017)
ETV1_eDBD_Methyl-HT-SELEX
0.822
0.795
ETV1
M04711_2.00
Homo sapiens
NRCCGGAAGTN
NACTTCCGGYN
SELEX
Yin et al.(2017)
ETV1_FL_Methyl-HT-SELEX
0.822
0.795
Ets96B
M03733_2.00
Drosophila melanogaster
DCCGKAAGYN
NRCTTMCGGH
SELEX
Nitta et al.(2015)
Ets96B_1
0.770
0.727
Ets96B
M06193_2.00
Drosophila melanogaster
RCCGGAAGYVV
BBRCTTCCGGY
B1H
Zhu et al.(2011)
Ets96B_SANGER_5_FBgn0039225
0.770
0.727
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG000956.1
Ets
1356
1399
QLWQFLVTLLDDPANAHFIAWTGRGMEFKLIEPEEVAGERYVYK
Links
Other
Ets
family TFs
Other
Alligator sinensis
TFs
432 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy