fgenesh2_pg.scaffold_167000034 (Branchiostoma floridae)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 fgenesh2_pg.scaffold_167000034 T177950_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ehf
M00158_2.00
Mus musculus
DNVMGGAARY

RYTTCCKBNH
PBM
Badis et al.(2009)
Ehf_3056
0.991 0.765
Ehf
M01484_2.00
Mus musculus
DNVMGGAARY

RYTTCCKBNH
PBM
Wei et al.(2010)
Ehf
0.991 0.765
Ehf
M09071_2.00
Mus musculus
NNANVAGGAAGTDVV

BBHACTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
EHF_MOUSE.H11MO.0.B
0.991 0.765
EHF
M02987_2.00
Homo sapiens
NACCCGGAAGTD

HACTTCCGGGTN
SELEX
Jolma et al.(2013)
EHF_1
0.989 0.765
EHF
M02733_2.00
Homo sapiens
ACCCGGAART

AYTTCCGGGT
SELEX
Jolma et al.(2010)
EHF_full_length_monomer
0.989 0.765
EHF
M09053_2.00
Homo sapiens
NNANVAGGAAGTDVV

BBHACTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
EHF_HUMAN.H11MO.0.B
0.989 0.765
EHF
M09533_2.00
Homo sapiens
WNVMGGAARY

RYTTCCKBNW
Misc
Heinz et al.(2010)
LoVo-EHF_GSE49402
0.989 0.765
EHF
M10500_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EHF_Q6
0.989 0.765
Elf3
M00156_2.00
Mus musculus
NNVVGGAARN

NYTTCCBBNN
PBM
Badis et al.(2009)
Elf3_3876
0.970 0.704
Elf3
M01476_2.00
Mus musculus
NNNNRDAWVN

NBWTHYNNNN
PBM
Wei et al.(2010)
Elf3
0.970 0.704
ELF3
M03002_2.00
Homo sapiens
WACCCGGAAGTR

YACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF3_1
0.970 0.704
ELF3
M03003_2.00
Homo sapiens
WACCCGGAAGTRD

HYACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF3_2
0.970 0.704
ELF3
M04788_2.00
Homo sapiens
ACSCGGAAGTRVNNNNNNDWWWW

WWWWHNNNNNNBYACTTCCGSGT
SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_1
0.970 0.704
ELF3
M04789_2.00
Homo sapiens
NTGTGCGGATGCV

BGCATCCGCACAN
SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_2
0.970 0.704
ELF3
M04783_2.00
Homo sapiens
ACVCGGAAGTRNNNNNNNNWWWW

WWWWNNNNNNNNYACTTCCGBGT
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_1
0.970 0.704
ELF3
M04784_2.00
Homo sapiens
VATAACGGATGYN

NRCATCCGTTATB
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_2
0.970 0.704
ELF3
M04785_2.00
Homo sapiens
VATDGCGGATGCN

NGCATCCGCHATB
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_3
0.970 0.704
ELF3
M04786_2.00
Homo sapiens
NWTRCGGAWGCN

NGCWTCCGYAWN
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_4
0.970 0.704
ELF3
M09060_2.00
Homo sapiens
NNANVAGGAARTDV

BHAYTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
ELF3_HUMAN.H11MO.0.A
0.970 0.704
Elf3
M09066_2.00
Mus musculus
NNANVAGGAARTDV

BHAYTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
ELF3_MOUSE.H11MO.0.B
0.970 0.704
ELF3
M10515_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESE1_Q3
0.970 0.704
ELF3
M10516_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESE1_Q6
0.970 0.704
ELF3
M04787_2.00
Homo sapiens
ACVAGGAAGTRVNNNNNNWWWWW

WWWWWNNNNNNBYACTTCCTBGT
SELEX
Yin et al.(2017)
ELF3_eDBD_Methyl-HT-SELEX
0.970 0.704
ELF3
M04790_2.00
Homo sapiens
ACMAGGAAGTAVNDDHNHDAWWW

WWWTHDNDHHNBTACTTCCTKGT
SELEX
Yin et al.(2017)
ELF3_FL_Methyl-HT-SELEX
0.970 0.704
Elf4
M01492_2.00
Mus musculus
NNVMGGAAVH

DBTTCCKBNN
PBM
Wei et al.(2010)
Elf4
0.947 0.531
ELF1
M02971_2.00
Homo sapiens
DACCCGGAAGTV

BACTTCCGGGTH
SELEX
Jolma et al.(2013)
ELF1_1
0.947 0.531
ELF1
M02972_2.00
Homo sapiens
WACCCGGAAGTR

YACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF1_2
0.947 0.531
ELF4
M02966_2.00
Homo sapiens
DACCCGGAAGTR

YACTTCCGGGTH
SELEX
Jolma et al.(2013)
ELF4_1
0.947 0.531
ELF1
M04740_2.00
Homo sapiens
NWHSCGGAAGYN

NRCTTCCGSDWN
SELEX
Yin et al.(2017)
ELF1_eDBD_HT-SELEX_1
0.947 0.531
ELF1
M04741_2.00
Homo sapiens
NDBVCGGAAGTN

NACTTCCGBVHN
SELEX
Yin et al.(2017)
ELF1_eDBD_HT-SELEX_2
0.947 0.531
ELF1
M04744_2.00
Homo sapiens
NWHSCGGAAGYN

NRCTTCCGSDWN
SELEX
Yin et al.(2017)
ELF1_FL_HT-SELEX_1
0.947 0.531
ELF1
M04745_2.00
Homo sapiens
DWBVCGGAAGTD

HACTTCCGBVWH
SELEX
Yin et al.(2017)
ELF1_FL_HT-SELEX_2
0.947 0.531
ELF4
M04716_2.00
Homo sapiens
NWHSCGGAAGTN

NACTTCCGSDWN
SELEX
Yin et al.(2017)
ELF4_eDBD_HT-SELEX_1
0.947 0.531
ELF4
M04717_2.00
Homo sapiens
NABSCGGAAGTR

YACTTCCGSVTN
SELEX
Yin et al.(2017)
ELF4_eDBD_HT-SELEX_2
0.947 0.531
ELF1
M07947_2.00
Homo sapiens
VVVDSSCGGAAGYSS

SSRCTTCCGSSHBBB
ChIP-seq
Gerstein et al.(2012)
GM12878_ELF1_HudsonAlpha
0.947 0.531
ELF1
M07948_2.00
Homo sapiens
NVDVSCGGAAGYVV

BBRCTTCCGSBHBN
ChIP-seq
Gerstein et al.(2012)
HepG2_ELF1_HudsonAlpha
0.947 0.531
ELF1
M07949_2.00
Homo sapiens
DVSCGGAAGYG

CRCTTCCGSBH
ChIP-seq
Gerstein et al.(2012)
K562_ELF1_HudsonAlpha
0.947 0.531
ELF1
M08198_2.00
Homo sapiens
WCCCGGAAGY

RCTTCCGGGW
ChIP-seq
Contrino et al.(2012)
Mv63
0.947 0.531
ELF1
M09050_2.00
Homo sapiens
VVWNSMGGAAGYVS

SBRCTTCCKSNWBB
Misc
Kulakovskiy et al.(2013)
ELF1_HUMAN.H11MO.0.A
0.947 0.531
Elf1
M09079_2.00
Mus musculus
VVDVSCGGAAGYVV

BBRCTTCCGSBHBB
Misc
Kulakovskiy et al.(2013)
ELF1_MOUSE.H11MO.0.A
0.947 0.531
ELF1
M09529_2.00
Homo sapiens
NVCCGGAAGY

RCTTCCGGBN
Misc
Heinz et al.(2010)
Jurkat-ELF1_SRA014231
0.947 0.531
ELF1
M10483_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_03
0.947 0.531
ELF1
M10484_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_07
0.947 0.531
ELF1
M10485_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q4
0.947 0.531
ELF1
M10486_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q5
0.947 0.531
ELF1
M10487_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF1_Q6
0.947 0.531
ELF1
M04742_2.00
Homo sapiens
NWNSMGGAAGTR

YACTTCCKSNWN
SELEX
Yin et al.(2017)
ELF1_eDBD_Methyl-HT-SELEX_1
0.947 0.531
ELF1
M04743_2.00
Homo sapiens
DDNVMGGAAGTR

YACTTCCKBNHH
SELEX
Yin et al.(2017)
ELF1_eDBD_Methyl-HT-SELEX_2
0.947 0.531
ELF1
M04746_2.00
Homo sapiens
NWHCMGGAAGTN

NACTTCCKGDWN
SELEX
Yin et al.(2017)
ELF1_FL_Methyl-HT-SELEX_1
0.947 0.531
ELF1
M04747_2.00
Homo sapiens
DABSCGGAAGTR

YACTTCCGSVTH
SELEX
Yin et al.(2017)
ELF1_FL_Methyl-HT-SELEX_2
0.947 0.531
ELF4
M04718_2.00
Homo sapiens
NAHCMGGAAGTR

YACTTCCKGDTN
SELEX
Yin et al.(2017)
ELF4_eDBD_Methyl-HT-SELEX_1
0.947 0.531
ELF4
M04719_2.00
Homo sapiens
NANVMGGAAGTD

HACTTCCKBNTN
SELEX
Yin et al.(2017)
ELF4_eDBD_Methyl-HT-SELEX_2
0.947 0.531
Elf5
M01490_2.00
Mus musculus
DNVVGGAARH

DYTTCCBBNH
PBM
Wei et al.(2010)
Elf5
0.933 0.691
ELF5
M02988_2.00
Homo sapiens
WNVMGGAAGTN

NACTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_1
0.933 0.691
ELF5
M02989_2.00
Homo sapiens
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_2
0.933 0.691
Elf5
M03011_2.00
Mus musculus
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
Elf5_1
0.933 0.691
ELF5
M04756_2.00
Homo sapiens
NDNVMGGAAGBD

HVCTTCCKBNHN
SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX
0.933 0.691
ELF5
M04758_2.00
Homo sapiens
NAMCCGGAAGYN

NRCTTCCGGKTN
SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX
0.933 0.691
ELF5
M09054_2.00
Homo sapiens
VVVANVMGGAAGHDV

BHDCTTCCKBNTBBB
Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A
0.933 0.691
Elf5
M09076_2.00
Mus musculus
RGRAVRAGGAAGDRRNN

NNYYHCTTCCTYBTYCY
Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A
0.933 0.691
ELF5
M09534_2.00
Homo sapiens
ABVMGGAAGT

ACTTCCKBVT
Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407
0.933 0.691
ELF5
M10501_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF5_01
0.933 0.691
ELF5
M04757_2.00
Homo sapiens
NABVAGGAAGTD

HACTTCCTBVTN
SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX
0.933 0.691
ELF5
M04759_2.00
Homo sapiens
DABVAGGAAGTD

HACTTCCTBVTH
SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX
0.933 0.691
Elf2
M01494_2.00
Mus musculus
NNVMGGAAVH

DBTTCCKBNN
PBM
Wei et al.(2010)
Elf2
0.932 0.531
ELF2
M04722_2.00
Homo sapiens
NWHSCGGAAGTN

NACTTCCGSDWN
SELEX
Yin et al.(2017)
ELF2_eDBD_HT-SELEX_1
0.932 0.531
ELF2
M04723_2.00
Homo sapiens
DRBSCGGAAGTD

HACTTCCGSVYH
SELEX
Yin et al.(2017)
ELF2_eDBD_HT-SELEX_2
0.932 0.531
ELF2
M04726_2.00
Homo sapiens
NAMCCGGAAGTV

BACTTCCGGKTN
SELEX
Yin et al.(2017)
ELF2_FL_HT-SELEX_1
0.932 0.531
ELF2
M04727_2.00
Homo sapiens
DAYSCGGAAGTR

YACTTCCGSRTH
SELEX
Yin et al.(2017)
ELF2_FL_HT-SELEX_2
0.932 0.531
ELF2
M09049_2.00
Homo sapiens
NDVSCGGAAGYVV

BBRCTTCCGSBHN
Misc
Kulakovskiy et al.(2013)
ELF2_HUMAN.H11MO.0.C
0.932 0.531
Elf2
M09080_2.00
Mus musculus
YDNCAGGAAGBRRVK

MBYYVCTTCCTGNHR
Misc
Kulakovskiy et al.(2013)
ELF2_MOUSE.H11MO.0.C
0.932 0.531
ELF2
M10480_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NERF_Q2
0.932 0.531
ELF2
M04724_2.00
Homo sapiens
NWHCMGGAAGTR

YACTTCCKGDWN
SELEX
Yin et al.(2017)
ELF2_eDBD_Methyl-HT-SELEX_1
0.932 0.531
ELF2
M04725_2.00
Homo sapiens
DANVCGGAAGTD

HACTTCCGBNTH
SELEX
Yin et al.(2017)
ELF2_eDBD_Methyl-HT-SELEX_2
0.932 0.531
ELF2
M04728_2.00
Homo sapiens
AAMCMGGAAGTR

YACTTCCKGKTT
SELEX
Yin et al.(2017)
ELF2_FL_Methyl-HT-SELEX_1
0.932 0.531
ELF2
M04729_2.00
Homo sapiens
RAYSMGGAAGTR

YACTTCCKSRTT
SELEX
Yin et al.(2017)
ELF2_FL_Methyl-HT-SELEX_2
0.932 0.531
Eip74EF
M03723_2.00
Drosophila melanogaster
WACCCGGAAGTR

YACTTCCGGGTW
SELEX
Nitta et al.(2015)
Eip74EF_1
0.897 0.519
Eip74EF
M03724_2.00
Drosophila melanogaster
WABSCGGAAGTR

YACTTCCGSVTW
SELEX
Nitta et al.(2015)
Eip74EF_2
0.897 0.519
Eip74EF
M06186_2.00
Drosophila melanogaster
WHMAGGAAKT

AMTTCCTKDW
B1H
Zhu et al.(2011)
Eip74EF_FlyReg_FBgn0000567
0.897 0.519
Eip74EF
M06187_2.00
Drosophila melanogaster
ACCCGGAAGT

ACTTCCGGGT
B1H
Zhu et al.(2011)
Eip74EF_SANGER_5_FBgn0000567
0.897 0.519
Eip74EF
M02679_2.00
Drosophila melanogaster
CMGGAAR

YTTCCKG
SELEX
Mathelier et al.(2014)
MA0026.1
0.897 0.519
Eip74EF
M09667_2.00
Drosophila melanogaster
VWHMMGGAART

AYTTCCKKDWB
Misc
Kulakovskiy et al.(2009)
Eip74EF
0.897 0.519
Eip74EF
M10521_2.00
Drosophila melanogaster
NNAAYCMGGAARTNNDV

BHNNAYTTCCKGRWTNN
Transfac
Matys et al.(2006)
I$E74A_01
0.897 0.519
ETV7
M04712_2.00
Homo sapiens
VVGGAAGYRCTTCCBB

VVGGAAGYRCTTCCBB
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_1
0.887 0.457
ETV7
M04713_2.00
Homo sapiens
RYTTCCSGGAARY

RYTTCCSGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_2
0.887 0.457
ETV7
M10471_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEL2_Q6
0.887 0.457
ETV7
M04714_2.00
Homo sapiens
NNGGAAGYRCTTCCNN

NNGGAAGYRCTTCCNN
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_1
0.887 0.457
ETV7
M04715_2.00
Homo sapiens
RYTTCCNGGAARY

RYTTCCNGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_2
0.887 0.457
Etv6
M01491_2.00
Mus musculus
NNNVGGAARH

DYTTCCBNNN
PBM
Wei et al.(2010)
Etv6
0.884 0.457
Etv6
M09077_2.00
Mus musculus
NSAGGAARB

VYTTCCTSN
Misc
Kulakovskiy et al.(2013)
ETV6_MOUSE.H11MO.0.C
0.884 0.457
Ets21C
M01972_2.00
Drosophila melanogaster
CCGGAARY

RYTTCCGG
PBM
Weirauch et al.(2014)
pTH6450
0.728 0.469
Ets21C
M03732_2.00
Drosophila melanogaster
NRCCGGAAGTV

BACTTCCGGYN
SELEX
Nitta et al.(2015)
Ets21C_1
0.728 0.469
Ets21C
M06192_2.00
Drosophila melanogaster
WCCGGAARY

RYTTCCGGW
B1H
Zhu et al.(2011)
Ets21c_SANGER_5_FBgn0005660
0.728 0.469
Gabpa
M00157_2.00
Mus musculus
NRCCGGAARY

RYTTCCGGYN
PBM
Badis et al.(2009)
Gabpa_2829
0.721 0.457
Gabpa
M01482_2.00
Mus musculus
RSCGGAARY

RYTTCCGSY
PBM
Wei et al.(2010)
Gabpa
0.721 0.457
GABPA
M02996_2.00
Homo sapiens
RCCGGAAGTD

HACTTCCGGY
SELEX
Jolma et al.(2013)
GABPA_1
0.721 0.457
GABPA
M04768_2.00
Homo sapiens
NRCCGGAARYN

NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_HT-SELEX
0.721 0.457
GABPA
M05865_2.00
Homo sapiens
RSCGGAWRYNN

NNRYWTCCGSY
SMiLE-seq
Isakova et al.(2017)
GABPA
0.721 0.457
Gabpa
M08113_2.00
Mus musculus
CCGGAAGYVVN

NBBRCTTCCGG
ChIP-seq
Mathelier et al.(2014)
MA0062.2
0.721 0.457
GABPA
M07952_2.00
Homo sapiens
VVCCGGAAGYV

BRCTTCCGGBB
ChIP-seq
Gerstein et al.(2012)
GM12878_GABP_HudsonAlpha
0.721 0.457
GABPA
M07953_2.00
Homo sapiens
NVCCGGAAGYV

BRCTTCCGGBN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_GABP_HudsonAlpha
0.721 0.457
GABPA
M07954_2.00
Homo sapiens
VVVCCGGAAGYNVN

NBNRCTTCCGGBBB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_GABP_HudsonAlpha
0.721 0.457
GABPA
M07955_2.00
Homo sapiens
NBVVVSCGGAAGYVV

BBRCTTCCGSBBBVN
ChIP-seq
Gerstein et al.(2012)
HepG2_GABP_HudsonAlpha
0.721 0.457
GABPA
M07956_2.00
Homo sapiens
VVVVCCGGAAGTN

NACTTCCGGBBBB
ChIP-seq
Gerstein et al.(2012)
K562_GABP_HudsonAlpha
0.721 0.457
GABPA
M09056_2.00
Homo sapiens
VVNRSCGGAAGYVV

BBRCTTCCGSYNBB
Misc
Kulakovskiy et al.(2013)
GABPA_HUMAN.H11MO.0.A
0.721 0.457
Gabpa
M09069_2.00
Mus musculus
NVVVSCGGAAGYRV

BYRCTTCCGSBBBN
Misc
Kulakovskiy et al.(2013)
GABPA_MOUSE.H11MO.0.A
0.721 0.457
GABPA
M09535_2.00
Homo sapiens
NRCMGGAAGY

RCTTCCKGYN
Misc
Heinz et al.(2010)
Jurkat-GABPa_GSE17954
0.721 0.457
GABPA
M10504_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_07
0.721 0.457
GABPA
M10505_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_08
0.721 0.457
GABPA
M10506_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_Q4
0.721 0.457
GABPA
M10507_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABP_B
0.721 0.457
GABPA
M10508_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GADP_01
0.721 0.457
GABPA
M04769_2.00
Homo sapiens
NRCCGGAARYN

NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_Methyl-HT-SELEX
0.721 0.457
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_167000034 Ets 413 494

Links

Other Ets family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

898 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action