CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15002081
(
Schmidtea mediterranea
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
SMU15002081
T178030_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ets98B
M03727_2.00
Drosophila melanogaster
TAMCGGATGCN
NGCATCCGKTA
SELEX
Nitta et al.(2015)
Ets98B_1
0.876
0.543
Ets98B
M03728_2.00
Drosophila melanogaster
TKGCGGATGCN
NGCATCCGCMA
SELEX
Nitta et al.(2015)
Ets98B_2
0.876
0.543
Ets98B
M03729_2.00
Drosophila melanogaster
ATGATCCGGGACN
NGTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_3
0.876
0.543
Ets98B
M03730_2.00
Drosophila melanogaster
GSATMCGKTA
TAMCGKATSC
SELEX
Nitta et al.(2015)
Ets98B_4
0.876
0.543
Ets98B
M03731_2.00
Drosophila melanogaster
ATGATCCGGGASN
NSTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_5
0.876
0.543
Ets98B
M06191_2.00
Drosophila melanogaster
ASCCGGAWC
GWTCCGGST
B1H
Zhu et al.(2011)
Ets98B_SANGER_10_FBgn0005659
0.876
0.543
Etv6
M01491_2.00
Mus musculus
NNNVGGAARH
DYTTCCBNNN
PBM
Wei et al.(2010)
Etv6
0.859
0.432
Etv6
M09077_2.00
Mus musculus
NSAGGAARB
VYTTCCTSN
Misc
Kulakovskiy et al.(2013)
ETV6_MOUSE.H11MO.0.C
0.859
0.432
Spdef
M00159_2.00
Mus musculus
NNVMGGAHNN
NNDTCCKBNN
PBM
Badis et al.(2009)
Spdef_0905
0.833
0.519
Spdef
M01488_2.00
Mus musculus
NDNVMGGAHN
NDTCCKBNHN
PBM
Wei et al.(2010)
Spdef
0.833
0.519
SPDEF
M02973_2.00
Homo sapiens
AMCCGGATRTD
HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_1
0.833
0.519
SPDEF
M02974_2.00
Homo sapiens
ATRATCCGGGAMMHY
RDKKTCCCGGATYAT
SELEX
Jolma et al.(2013)
SPDEF_2
0.833
0.519
SPDEF
M02975_2.00
Homo sapiens
RCAGDAAGAAGTAWWM
KWWTACTTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_3
0.833
0.519
SPDEF
M02976_2.00
Homo sapiens
AMCCGGATRTD
HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_4
0.833
0.519
SPDEF
M02977_2.00
Homo sapiens
WTRATCCGGGACCMC
GKGGTCCCGGATYAW
SELEX
Jolma et al.(2013)
SPDEF_5
0.833
0.519
SPDEF
M02978_2.00
Homo sapiens
RCAGDAAGAMGTAWHM
KDWTACKTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_6
0.833
0.519
SPDEF
M04748_2.00
Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_eDBD_HT-SELEX
0.833
0.519
SPDEF
M04750_2.00
Homo sapiens
NWVCCGGATRYN
NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_FL_HT-SELEX
0.833
0.519
SPDEF
M09530_2.00
Homo sapiens
WVCMGGAWVY
RBWTCCKGBW
Misc
Heinz et al.(2010)
VCaP-SPDEF_SRA014231
0.833
0.519
SPDEF
M04749_2.00
Homo sapiens
NAVCMGGATRYD
HRYATCCKGBTN
SELEX
Yin et al.(2017)
SPDEF_eDBD_Methyl-HT-SELEX
0.833
0.519
SPDEF
M04751_2.00
Homo sapiens
NAVCMGKATRYD
HRYATMCKGBTN
SELEX
Yin et al.(2017)
SPDEF_FL_Methyl-HT-SELEX
0.833
0.519
ETV7
M04712_2.00
Homo sapiens
VVGGAAGYRCTTCCBB
VVGGAAGYRCTTCCBB
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_1
0.766
0.383
ETV7
M04713_2.00
Homo sapiens
RYTTCCSGGAARY
RYTTCCSGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_2
0.766
0.383
ETV7
M10471_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEL2_Q6
0.766
0.383
ETV7
M04714_2.00
Homo sapiens
NNGGAAGYRCTTCCNN
NNGGAAGYRCTTCCNN
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_1
0.766
0.383
ETV7
M04715_2.00
Homo sapiens
RYTTCCNGGAARY
RYTTCCNGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_2
0.766
0.383
Ehf
M00158_2.00
Mus musculus
DNVMGGAARY
RYTTCCKBNH
PBM
Badis et al.(2009)
Ehf_3056
0.753
0.407
Ehf
M01484_2.00
Mus musculus
DNVMGGAARY
RYTTCCKBNH
PBM
Wei et al.(2010)
Ehf
0.753
0.407
Ehf
M09071_2.00
Mus musculus
NNANVAGGAAGTDVV
BBHACTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
EHF_MOUSE.H11MO.0.B
0.753
0.407
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15002081
Ets
356
440
SLWQFLMCLLDSSRYKEHSTGIRWVHRSIGIFHIVDSKQVANLWGQYKERRDKMTYDSLARSLRHYYKKNLMAKINNRRLVYQIA
Links
Other
Ets
family TFs
Other
Schmidtea mediterranea
TFs
334 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy