CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFUN002466
(
Anopheles funestus
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
AFUN002466
T178202_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ets97D
M06189_2.00
Drosophila melanogaster
ACCGGAARY
RYTTCCGGT
B1H
Zhu et al.(2011)
Ets97D_SANGER_10_FBgn0004510
0.778
0.394
Gabpa
M00157_2.00
Mus musculus
NRCCGGAARY
RYTTCCGGYN
PBM
Badis et al.(2009)
Gabpa_2829
0.770
0.400
Gabpa
M01482_2.00
Mus musculus
RSCGGAARY
RYTTCCGSY
PBM
Wei et al.(2010)
Gabpa
0.770
0.400
GABPA
M02996_2.00
Homo sapiens
RCCGGAAGTD
HACTTCCGGY
SELEX
Jolma et al.(2013)
GABPA_1
0.770
0.400
GABPA
M04768_2.00
Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_HT-SELEX
0.770
0.400
GABPA
M05865_2.00
Homo sapiens
RSCGGAWRYNN
NNRYWTCCGSY
SMiLE-seq
Isakova et al.(2017)
GABPA
0.770
0.400
Gabpa
M08113_2.00
Mus musculus
CCGGAAGYVVN
NBBRCTTCCGG
ChIP-seq
Mathelier et al.(2014)
MA0062.2
0.770
0.400
GABPA
M07952_2.00
Homo sapiens
VVCCGGAAGYV
BRCTTCCGGBB
ChIP-seq
Gerstein et al.(2012)
GM12878_GABP_HudsonAlpha
0.770
0.400
GABPA
M07953_2.00
Homo sapiens
NVCCGGAAGYV
BRCTTCCGGBN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_GABP_HudsonAlpha
0.770
0.400
GABPA
M07954_2.00
Homo sapiens
VVVCCGGAAGYNVN
NBNRCTTCCGGBBB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_GABP_HudsonAlpha
0.770
0.400
GABPA
M07955_2.00
Homo sapiens
NBVVVSCGGAAGYVV
BBRCTTCCGSBBBVN
ChIP-seq
Gerstein et al.(2012)
HepG2_GABP_HudsonAlpha
0.770
0.400
GABPA
M07956_2.00
Homo sapiens
VVVVCCGGAAGTN
NACTTCCGGBBBB
ChIP-seq
Gerstein et al.(2012)
K562_GABP_HudsonAlpha
0.770
0.400
GABPA
M09056_2.00
Homo sapiens
VVNRSCGGAAGYVV
BBRCTTCCGSYNBB
Misc
Kulakovskiy et al.(2013)
GABPA_HUMAN.H11MO.0.A
0.770
0.400
Gabpa
M09069_2.00
Mus musculus
NVVVSCGGAAGYRV
BYRCTTCCGSBBBN
Misc
Kulakovskiy et al.(2013)
GABPA_MOUSE.H11MO.0.A
0.770
0.400
GABPA
M09535_2.00
Homo sapiens
NRCMGGAAGY
RCTTCCKGYN
Misc
Heinz et al.(2010)
Jurkat-GABPa_GSE17954
0.770
0.400
GABPA
M10504_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_07
0.770
0.400
GABPA
M10505_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_08
0.770
0.400
GABPA
M10506_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABPA_Q4
0.770
0.400
GABPA
M10507_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GABP_B
0.770
0.400
GABPA
M10508_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GADP_01
0.770
0.400
GABPA
M04769_2.00
Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN
SELEX
Yin et al.(2017)
GABPA_eDBD_Methyl-HT-SELEX
0.770
0.400
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFUN002466-PA
Ets
406
485
QLWQFLLEILTDREHRAIIQWMGTDGEFKLCNPELVAQLWGERKNKPTMNYEKLSRALRYYYDGDMISKVHGKRFVYKFV
AFUN002466-PA
Ets
788
867
QLWQFLLEILTDREHRAIIQWMGTDGEFKLCNPELVAQLWGERKNKPTMNYEKLSRALRYYYDGDMISKVHGKRFVYKFV
Links
Other
Ets
family TFs
Other
Anopheles funestus
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy