CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASIM_0001461601
(
Anisakis simplex
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
ASIM_0001461601
T178363_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ETV6
M02990_2.00
Homo sapiens
SCGGAASCGGAAGYR
YRCTTCCGSTTCCGS
SELEX
Jolma et al.(2013)
ETV6_1
0.875
0.077
ETV6
M02991_2.00
Homo sapiens
VSCGGAAGTD
HACTTCCGSB
SELEX
Jolma et al.(2013)
ETV6_2
0.875
0.077
elk4
M01971_2.00
Tetraodon nigroviridis
CCGGAAGT
ACTTCCGG
PBM
Weirauch et al.(2014)
pTH6345
0.753
0.769
Elk4
M01489_2.00
Mus musculus
NNVCGGAWRH
DYWTCCGBNN
PBM
Wei et al.(2010)
Elk4
0.753
0.744
ELK4
M03001_2.00
Homo sapiens
ACCGGAARYN
NRYTTCCGGT
SELEX
Jolma et al.(2013)
ELK4_1
0.753
0.744
ELK4
M04780_2.00
Homo sapiens
NRSCGGAWRYN
NRYWTCCGSYN
SELEX
Yin et al.(2017)
ELK4_FL_HT-SELEX_1
0.753
0.744
ELK4
M04781_2.00
Homo sapiens
VHCGKAAATSMN
NKSATTTMCGDB
SELEX
Yin et al.(2017)
ELK4_FL_HT-SELEX_2
0.753
0.744
ELK4
M08112_2.00
Homo sapiens
VCCGGAAGYVV
BBRCTTCCGGB
ChIP-seq
Mathelier et al.(2014)
MA0076.2
0.753
0.744
ELK4
M07957_2.00
Homo sapiens
CCGGAAGYNV
BNRCTTCCGG
ChIP-seq
Gerstein et al.(2012)
HEK293b_ELK4_UCD
0.753
0.744
ELK4
M07958_2.00
Homo sapiens
NVCCGGAAGYN
NRCTTCCGGBN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ELK4_UCD
0.753
0.744
ELK4
M09059_2.00
Homo sapiens
VVCCGGAAGYRV
BYRCTTCCGGBB
Misc
Kulakovskiy et al.(2013)
ELK4_HUMAN.H11MO.0.A
0.753
0.744
Elk4
M09075_2.00
Mus musculus
VVRVMGGAARYRN
NYRYTTCCKBYBB
Misc
Kulakovskiy et al.(2013)
ELK4_MOUSE.H11MO.0.B
0.753
0.744
ELK4
M10513_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SAP1A_01
0.753
0.744
ELK4
M10514_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SAP1A_Q6
0.753
0.744
ELK4
M04782_2.00
Homo sapiens
NRNMGGAWRYN
NRYWTCCKNYN
SELEX
Yin et al.(2017)
ELK4_FL_Methyl-HT-SELEX
0.753
0.744
XP_911724.4
M01496_2.00
Mus musculus
NNNMGGAWRH
DYWTCCKNNN
PBM
Wei et al.(2010)
Gm4881
0.750
0.641
ERF
M02968_2.00
Homo sapiens
ACCGGAARTV
BAYTTCCGGT
SELEX
Jolma et al.(2013)
ERF_1
0.750
0.641
Elk3
M01481_2.00
Mus musculus
NNSCGGAAVY
RBTTCCGSNN
PBM
Wei et al.(2010)
Elk3
0.731
0.718
ELK3
M02969_2.00
Homo sapiens
RCCGGAAGTN
NACTTCCGGY
SELEX
Jolma et al.(2013)
ELK3_1
0.731
0.718
Elk3
M03010_2.00
Mus musculus
ACCGGAAGTD
HACTTCCGGT
SELEX
Jolma et al.(2013)
Elk3_1
0.731
0.718
ELK3
M04730_2.00
Homo sapiens
NRCCGGAAGYN
NRCTTCCGGYN
SELEX
Yin et al.(2017)
ELK3_eDBD_HT-SELEX_1
0.731
0.718
ELK3
M04731_2.00
Homo sapiens
STCGTAAATRCM
KGYATTTACGAS
SELEX
Yin et al.(2017)
ELK3_eDBD_HT-SELEX_2
0.731
0.718
ELK3
M04733_2.00
Homo sapiens
RCCGGAAGTN
NACTTCCGGY
SELEX
Yin et al.(2017)
ELK3_FL_HT-SELEX_1
0.731
0.718
ELK3
M04734_2.00
Homo sapiens
CTCGTAAATGCN
NGCATTTACGAG
SELEX
Yin et al.(2017)
ELK3_FL_HT-SELEX_2
0.731
0.718
ELK3
M10481_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NET_Q6_01
0.731
0.718
ELK3
M10482_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NET_Q6
0.731
0.718
ELK3
M04732_2.00
Homo sapiens
NRCCGGAAGYN
NRCTTCCGGYN
SELEX
Yin et al.(2017)
ELK3_eDBD_Methyl-HT-SELEX
0.731
0.718
ELK3
M04735_2.00
Homo sapiens
NRCCGGAAGYN
NRCTTCCGGYN
SELEX
Yin et al.(2017)
ELK3_FL_Methyl-HT-SELEX
0.731
0.718
Etv3
M01477_2.00
Mus musculus
NNNVGGAWRN
NYWTCCBNNN
PBM
Wei et al.(2010)
Etv3
0.719
0.641
ETV3
M02970_2.00
Homo sapiens
ACCGGAAGTV
BACTTCCGGT
SELEX
Jolma et al.(2013)
ETV3_1
0.719
0.641
ETV3
M04736_2.00
Homo sapiens
NANCGGAWWTCCGDTN
NAHCGGAWWTCCGNTN
SELEX
Yin et al.(2017)
ETV3_eDBD_HT-SELEX_1
0.719
0.641
ETV3
M04737_2.00
Homo sapiens
NBCGGAARTDSYRYTTCCGNW
WNCGGAARYRSHAYTTCCGVN
SELEX
Yin et al.(2017)
ETV3_eDBD_HT-SELEX_2
0.719
0.641
ETV3
M04738_2.00
Homo sapiens
NAMCGGAWWTCCGKTN
NAMCGGAWWTCCGKTN
SELEX
Yin et al.(2017)
ETV3_eDBD_Methyl-HT-SELEX_1
0.719
0.641
ETV3
M04739_2.00
Homo sapiens
DNMGGAARTNNNAYTTCCKNH
DNMGGAARTNNNAYTTCCKNH
SELEX
Yin et al.(2017)
ETV3_eDBD_Methyl-HT-SELEX_2
0.719
0.641
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASIM_0001461601-mRNA-1
Ets
1
40
LWGTYKHKPKMNYDKLSRALRYYYSKGIIKKVLFIERFVQ
Links
Other
Ets
family TFs
Other
Anisakis simplex
TFs
574 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy