nLs.2.1.2.g03030 (Litomosoides sigmodontis)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 nLs.2.1.2.g03030 T178648_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EHF
M02987_2.00
Homo sapiens
NACCCGGAAGTD

HACTTCCGGGTN
SELEX
Jolma et al.(2013)
EHF_1
0.878 0.617
EHF
M02733_2.00
Homo sapiens
ACCCGGAART

AYTTCCGGGT
SELEX
Jolma et al.(2010)
EHF_full_length_monomer
0.878 0.617
EHF
M09053_2.00
Homo sapiens
NNANVAGGAAGTDVV

BBHACTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
EHF_HUMAN.H11MO.0.B
0.878 0.617
EHF
M09533_2.00
Homo sapiens
WNVMGGAARY

RYTTCCKBNW
Misc
Heinz et al.(2010)
LoVo-EHF_GSE49402
0.878 0.617
EHF
M10500_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EHF_Q6
0.878 0.617
Ehf
M00158_2.00
Mus musculus
DNVMGGAARY

RYTTCCKBNH
PBM
Badis et al.(2009)
Ehf_3056
0.821 0.605
Ehf
M01484_2.00
Mus musculus
DNVMGGAARY

RYTTCCKBNH
PBM
Wei et al.(2010)
Ehf
0.821 0.605
Ehf
M09071_2.00
Mus musculus
NNANVAGGAAGTDVV

BBHACTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
EHF_MOUSE.H11MO.0.B
0.821 0.605
Elf3
M00156_2.00
Mus musculus
NNVVGGAARN

NYTTCCBBNN
PBM
Badis et al.(2009)
Elf3_3876
0.818 0.568
Elf3
M01476_2.00
Mus musculus
NNNNRDAWVN

NBWTHYNNNN
PBM
Wei et al.(2010)
Elf3
0.818 0.568
ELF3
M03002_2.00
Homo sapiens
WACCCGGAAGTR

YACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF3_1
0.818 0.568
ELF3
M03003_2.00
Homo sapiens
WACCCGGAAGTRD

HYACTTCCGGGTW
SELEX
Jolma et al.(2013)
ELF3_2
0.818 0.568
ELF3
M04788_2.00
Homo sapiens
ACSCGGAAGTRVNNNNNNDWWWW

WWWWHNNNNNNBYACTTCCGSGT
SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_1
0.818 0.568
ELF3
M04789_2.00
Homo sapiens
NTGTGCGGATGCV

BGCATCCGCACAN
SELEX
Yin et al.(2017)
ELF3_FL_HT-SELEX_2
0.818 0.568
ELF3
M04783_2.00
Homo sapiens
ACVCGGAAGTRNNNNNNNNWWWW

WWWWNNNNNNNNYACTTCCGBGT
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_1
0.818 0.568
ELF3
M04784_2.00
Homo sapiens
VATAACGGATGYN

NRCATCCGTTATB
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_2
0.818 0.568
ELF3
M04785_2.00
Homo sapiens
VATDGCGGATGCN

NGCATCCGCHATB
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_3
0.818 0.568
ELF3
M04786_2.00
Homo sapiens
NWTRCGGAWGCN

NGCWTCCGYAWN
SELEX
Yin et al.(2017)
ELF3_eDBD_HT-SELEX_4
0.818 0.568
ELF3
M09060_2.00
Homo sapiens
NNANVAGGAARTDV

BHAYTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
ELF3_HUMAN.H11MO.0.A
0.818 0.568
Elf3
M09066_2.00
Mus musculus
NNANVAGGAARTDV

BHAYTTCCTBNTNN
Misc
Kulakovskiy et al.(2013)
ELF3_MOUSE.H11MO.0.B
0.818 0.568
ELF3
M10515_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESE1_Q3
0.818 0.568
ELF3
M10516_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESE1_Q6
0.818 0.568
ELF3
M04787_2.00
Homo sapiens
ACVAGGAAGTRVNNNNNNWWWWW

WWWWWNNNNNNBYACTTCCTBGT
SELEX
Yin et al.(2017)
ELF3_eDBD_Methyl-HT-SELEX
0.818 0.568
ELF3
M04790_2.00
Homo sapiens
ACMAGGAAGTAVNDDHNHDAWWW

WWWTHDNDHHNBTACTTCCTKGT
SELEX
Yin et al.(2017)
ELF3_FL_Methyl-HT-SELEX
0.818 0.568
Etv6
M01491_2.00
Mus musculus
NNNVGGAARH

DYTTCCBNNN
PBM
Wei et al.(2010)
Etv6
0.784 0.420
Etv6
M09077_2.00
Mus musculus
NSAGGAARB

VYTTCCTSN
Misc
Kulakovskiy et al.(2013)
ETV6_MOUSE.H11MO.0.C
0.784 0.420
Elf5
M01490_2.00
Mus musculus
DNVVGGAARH

DYTTCCBBNH
PBM
Wei et al.(2010)
Elf5
0.766 0.568
ELF5
M02988_2.00
Homo sapiens
WNVMGGAAGTN

NACTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_1
0.766 0.568
ELF5
M02989_2.00
Homo sapiens
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
ELF5_2
0.766 0.568
Elf5
M03011_2.00
Mus musculus
WNVMGGAARYN

NRYTTCCKBNW
SELEX
Jolma et al.(2013)
Elf5_1
0.766 0.568
ELF5
M04756_2.00
Homo sapiens
NDNVMGGAAGBD

HVCTTCCKBNHN
SELEX
Yin et al.(2017)
ELF5_eDBD_HT-SELEX
0.766 0.568
ELF5
M04758_2.00
Homo sapiens
NAMCCGGAAGYN

NRCTTCCGGKTN
SELEX
Yin et al.(2017)
ELF5_FL_HT-SELEX
0.766 0.568
ELF5
M09054_2.00
Homo sapiens
VVVANVMGGAAGHDV

BHDCTTCCKBNTBBB
Misc
Kulakovskiy et al.(2013)
ELF5_HUMAN.H11MO.0.A
0.766 0.568
Elf5
M09076_2.00
Mus musculus
RGRAVRAGGAAGDRRNN

NNYYHCTTCCTYBTYCY
Misc
Kulakovskiy et al.(2013)
ELF5_MOUSE.H11MO.0.A
0.766 0.568
ELF5
M09534_2.00
Homo sapiens
ABVMGGAAGT

ACTTCCKBVT
Misc
Heinz et al.(2010)
T47D-ELF5_GSE30407
0.766 0.568
ELF5
M10501_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ELF5_01
0.766 0.568
ELF5
M04757_2.00
Homo sapiens
NABVAGGAAGTD

HACTTCCTBVTN
SELEX
Yin et al.(2017)
ELF5_eDBD_Methyl-HT-SELEX
0.766 0.568
ELF5
M04759_2.00
Homo sapiens
DABVAGGAAGTD

HACTTCCTBVTH
SELEX
Yin et al.(2017)
ELF5_FL_Methyl-HT-SELEX
0.766 0.568
ETV7
M04712_2.00
Homo sapiens
VVGGAAGYRCTTCCBB

VVGGAAGYRCTTCCBB
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_1
0.731 0.407
ETV7
M04713_2.00
Homo sapiens
RYTTCCSGGAARY

RYTTCCSGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_HT-SELEX_2
0.731 0.407
ETV7
M10471_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEL2_Q6
0.731 0.407
ETV7
M04714_2.00
Homo sapiens
NNGGAAGYRCTTCCNN

NNGGAAGYRCTTCCNN
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_1
0.731 0.407
ETV7
M04715_2.00
Homo sapiens
RYTTCCNGGAARY

RYTTCCNGGAARY
SELEX
Yin et al.(2017)
ETV7_FL_Methyl-HT-SELEX_2
0.731 0.407
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t03030-RA Ets 351 437

Links

Other Ets family TFs
Other Litomosoides sigmodontis TFs

Invalid Input OrderBy

445 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action