nOo.2.0.1.g02415 (Onchocerca ochengi)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 nOo.2.0.1.g02415 T178654_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Ets98B
M03727_2.00
Drosophila melanogaster
TAMCGGATGCN

NGCATCCGKTA
SELEX
Nitta et al.(2015)
Ets98B_1
0.880 0.617
Ets98B
M03728_2.00
Drosophila melanogaster
TKGCGGATGCN

NGCATCCGCMA
SELEX
Nitta et al.(2015)
Ets98B_2
0.880 0.617
Ets98B
M03729_2.00
Drosophila melanogaster
ATGATCCGGGACN

NGTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_3
0.880 0.617
Ets98B
M03730_2.00
Drosophila melanogaster
GSATMCGKTA

TAMCGKATSC
SELEX
Nitta et al.(2015)
Ets98B_4
0.880 0.617
Ets98B
M03731_2.00
Drosophila melanogaster
ATGATCCGGGASN

NSTCCCGGATCAT
SELEX
Nitta et al.(2015)
Ets98B_5
0.880 0.617
Ets98B
M06191_2.00
Drosophila melanogaster
ASCCGGAWC

GWTCCGGST
B1H
Zhu et al.(2011)
Ets98B_SANGER_10_FBgn0005659
0.880 0.617
Spdef
M00159_2.00
Mus musculus
NNVMGGAHNN

NNDTCCKBNN
PBM
Badis et al.(2009)
Spdef_0905
0.833 0.630
Spdef
M01488_2.00
Mus musculus
NDNVMGGAHN

NDTCCKBNHN
PBM
Wei et al.(2010)
Spdef
0.833 0.630
SPDEF
M02973_2.00
Homo sapiens
AMCCGGATRTD

HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_1
0.833 0.630
SPDEF
M02974_2.00
Homo sapiens
ATRATCCGGGAMMHY

RDKKTCCCGGATYAT
SELEX
Jolma et al.(2013)
SPDEF_2
0.833 0.630
SPDEF
M02975_2.00
Homo sapiens
RCAGDAAGAAGTAWWM

KWWTACTTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_3
0.833 0.630
SPDEF
M02976_2.00
Homo sapiens
AMCCGGATRTD

HAYATCCGGKT
SELEX
Jolma et al.(2013)
SPDEF_4
0.833 0.630
SPDEF
M02977_2.00
Homo sapiens
WTRATCCGGGACCMC

GKGGTCCCGGATYAW
SELEX
Jolma et al.(2013)
SPDEF_5
0.833 0.630
SPDEF
M02978_2.00
Homo sapiens
RCAGDAAGAMGTAWHM

KDWTACKTCTTHCTGY
SELEX
Jolma et al.(2013)
SPDEF_6
0.833 0.630
SPDEF
M04748_2.00
Homo sapiens
NWVCCGGATRYN

NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_eDBD_HT-SELEX
0.833 0.630
SPDEF
M04750_2.00
Homo sapiens
NWVCCGGATRYN

NRYATCCGGBWN
SELEX
Yin et al.(2017)
SPDEF_FL_HT-SELEX
0.833 0.630
SPDEF
M09530_2.00
Homo sapiens
WVCMGGAWVY

RBWTCCKGBW
Misc
Heinz et al.(2010)
VCaP-SPDEF_SRA014231
0.833 0.630
SPDEF
M04749_2.00
Homo sapiens
NAVCMGGATRYD

HRYATCCKGBTN
SELEX
Yin et al.(2017)
SPDEF_eDBD_Methyl-HT-SELEX
0.833 0.630
SPDEF
M04751_2.00
Homo sapiens
NAVCMGKATRYD

HRYATMCKGBTN
SELEX
Yin et al.(2017)
SPDEF_FL_Methyl-HT-SELEX
0.833 0.630
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t02415-RA Ets 377 459

Links

Other Ets family TFs
Other Onchocerca ochengi TFs

Invalid Input OrderBy

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action