CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000987201
(
Trichobilharzia regenti
)
Ets
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00178 (Ets)
IPR000418
TRE_0000987201
T178880_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Etv1
M01478_2.00
Mus musculus
NNSCGGAWVH
DBWTCCGSNN
PBM
Wei et al.(2010)
Etv1
0.759
0.415
Etv1
M01479_2.00
Mus musculus
NDCCGGAWRY
RYWTCCGGHN
PBM
Wei et al.(2010)
Gm5454
0.759
0.415
Etv4
M01487_2.00
Mus musculus
NDSCGGAWRY
RYWTCCGSHN
PBM
Wei et al.(2010)
Etv4
0.759
0.415
ETV1
M02964_2.00
Homo sapiens
RCCGGAWRYN
NRYWTCCGGY
SELEX
Jolma et al.(2013)
ETV1_1
0.759
0.415
ETV4
M03006_2.00
Homo sapiens
DCCGGAWRYN
NRYWTCCGGH
SELEX
Jolma et al.(2013)
ETV4_1
0.759
0.415
ETV1
M04708_2.00
Homo sapiens
NDVCGGAWRYN
NRYWTCCGBHN
SELEX
Yin et al.(2017)
ETV1_eDBD_HT-SELEX
0.759
0.415
ETV1
M04710_2.00
Homo sapiens
NRCCGGAAGYD
HRCTTCCGGYN
SELEX
Yin et al.(2017)
ETV1_FL_HT-SELEX
0.759
0.415
ETV4
M04793_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_eDBD_HT-SELEX
0.759
0.415
ETV4
M04796_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_FL_HT-SELEX_1
0.759
0.415
ETV4
M04797_2.00
Homo sapiens
VTCGTAAATGCH
DGCATTTACGAB
SELEX
Yin et al.(2017)
ETV4_FL_HT-SELEX_2
0.759
0.415
ETV1
M09046_2.00
Homo sapiens
VNCCGGAAGBN
NVCTTCCGGNB
Misc
Kulakovskiy et al.(2013)
ETV1_HUMAN.H11MO.0.A
0.759
0.415
ETV4
M09062_2.00
Homo sapiens
VNSAGGAARNN
NNYTTCCTSNB
Misc
Kulakovskiy et al.(2013)
ETV4_HUMAN.H11MO.0.B
0.759
0.415
Etv4
M09073_2.00
Mus musculus
VMGGAARB
VYTTCCKB
Misc
Kulakovskiy et al.(2013)
ETV4_MOUSE.H11MO.0.B
0.759
0.415
ETV1
M09528_2.00
Homo sapiens
NRCMGGAAGY
RCTTCCKGYN
Misc
Heinz et al.(2010)
GIST48-ETV1_GSE22441
0.759
0.415
ETV4
M10517_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PEA3_Q6_02
0.759
0.415
ETV4
M10518_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PEA3_Q6
0.759
0.415
ETV1
M04709_2.00
Homo sapiens
NRSMGGAWRBN
NVYWTCCKSYN
SELEX
Yin et al.(2017)
ETV1_eDBD_Methyl-HT-SELEX
0.759
0.415
ETV1
M04711_2.00
Homo sapiens
NRCCGGAAGTN
NACTTCCGGYN
SELEX
Yin et al.(2017)
ETV1_FL_Methyl-HT-SELEX
0.759
0.415
ETV4
M04794_2.00
Homo sapiens
RSMGGAAGGAWRYN
NRYWTCCTTCCKSY
SELEX
Yin et al.(2017)
ETV4_eDBD_Methyl-HT-SELEX_1
0.759
0.415
ETV4
M04795_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_eDBD_Methyl-HT-SELEX_2
0.759
0.415
ETV4
M04798_2.00
Homo sapiens
RCMGGAAGKAWGYN
NRCWTMCTTCCKGY
SELEX
Yin et al.(2017)
ETV4_FL_Methyl-HT-SELEX_1
0.759
0.415
ETV4
M04799_2.00
Homo sapiens
NRCCGGAWGYN
NRCWTCCGGYN
SELEX
Yin et al.(2017)
ETV4_FL_Methyl-HT-SELEX_2
0.759
0.415
Etv5
M01485_2.00
Mus musculus
DSCGGAWRY
RYWTCCGSH
PBM
Wei et al.(2010)
Etv5
0.759
0.400
ETV5
M03007_2.00
Homo sapiens
DVCGGAWRYN
NRYWTCCGBH
SELEX
Jolma et al.(2013)
ETV5_1
0.759
0.400
ETV5
M04800_2.00
Homo sapiens
NDSCGGAWRBN
NVYWTCCGSHN
SELEX
Yin et al.(2017)
ETV5_eDBD_HT-SELEX
0.759
0.400
ETV5
M09063_2.00
Homo sapiens
VRRVAGGAARDDRN
NYHHYTTCCTBYYB
Misc
Kulakovskiy et al.(2013)
ETV5_HUMAN.H11MO.0.C
0.759
0.400
ETV5
M04801_2.00
Homo sapiens
RSMGGAAGGAWGYD
HRCWTCCTTCCKSY
SELEX
Yin et al.(2017)
ETV5_eDBD_Methyl-HT-SELEX_1
0.759
0.400
ETV5
M04802_2.00
Homo sapiens
NRSMGGAWGBN
NVCWTCCKSYN
SELEX
Yin et al.(2017)
ETV5_eDBD_Methyl-HT-SELEX_2
0.759
0.400
Ets1
M01493_2.00
Mus musculus
NNVMGGAWRH
DYWTCCKBNN
PBM
Wei et al.(2010)
Ets1
0.733
0.400
ETS1
M02983_2.00
Homo sapiens
ACCGGAWRYN
NRYWTCCGGT
SELEX
Jolma et al.(2013)
ETS1_1
0.733
0.400
ETS1
M02984_2.00
Homo sapiens
RCCGGAWRYRYWTCCGSH
DSCGGAWRYRYWTCCGGY
SELEX
Jolma et al.(2013)
ETS1_2
0.733
0.400
ETS1
M02985_2.00
Homo sapiens
ACCGGAWRYN
NRYWTCCGGT
SELEX
Jolma et al.(2013)
ETS1_3
0.733
0.400
ETS1
M02986_2.00
Homo sapiens
NCCGGAAGKRCWTCCGGC
GCCGGAWGYMCTTCCGGN
SELEX
Jolma et al.(2013)
ETS1_4
0.733
0.400
ETS2
M04778_2.00
Homo sapiens
NACCGGAWGYRCWTCCGGTN
NACCGGAWGYRCWTCCGGTN
SELEX
Yin et al.(2017)
ETS2_FL_HT-SELEX
0.733
0.400
ETS1
M02645_2.00
Homo sapiens
VCGGAWRNN
NNYWTCCGB
SELEX
Hallikas et al.(2006)
cETS1
0.733
0.400
ETS1
M07950_2.00
Homo sapiens
GSMYBCTGGGAVWTGTAGTYY
RRACTACAWBTCCCAGVRKSC
ChIP-seq
Gerstein et al.(2012)
GM12878_ETS1_HudsonAlpha
0.733
0.400
ETS1
M07951_2.00
Homo sapiens
CMYBCTGGGAVWTGTAGTYYN
NRRACTACAWBTCCCAGVRKG
ChIP-seq
Gerstein et al.(2012)
K562_ETS1_HudsonAlpha
0.733
0.400
ETS1
M09052_2.00
Homo sapiens
VVRSMGGAAGYGR
YCRCTTCCKSYBB
Misc
Kulakovskiy et al.(2013)
ETS1_HUMAN.H11MO.0.A
0.733
0.400
ETS2
M09058_2.00
Homo sapiens
NNVRGGAARNRRR
YYYNYTTCCYBNN
Misc
Kulakovskiy et al.(2013)
ETS2_HUMAN.H11MO.0.B
0.733
0.400
Ets1
M09078_2.00
Mus musculus
VVVRSMGGAAGYGV
BCRCTTCCKSYBBB
Misc
Kulakovskiy et al.(2013)
ETS1_MOUSE.H11MO.0.A
0.733
0.400
Ets2
M09074_2.00
Mus musculus
NNVRGGAARNRRR
YYYNYTTCCYBNN
Misc
Kulakovskiy et al.(2013)
ETS2_MOUSE.H11MO.0.A
0.733
0.400
ETS1
M09532_2.00
Homo sapiens
RCMGGAAGTG
CACTTCCKGY
Misc
Heinz et al.(2010)
Jurkat-ETS1_GSE17954
0.733
0.400
ETS1B_CHICK
M10520_2.00
Gallus gallus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CETS168_Q6
0.733
0.400
ETS1
M10493_2.00
Homo sapiens
NCMGGAWRYN
NRYWTCCKGN
Transfac
Matys et al.(2006)
V$CETS1P54_01
0.733
0.400
ETS1
M10494_2.00
Homo sapiens
VNWVMGGAWRHNN
NNDYWTCCKBWNB
Transfac
Matys et al.(2006)
V$CETS1P54_02
0.733
0.400
ETS1
M10495_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CETS1P54_03
0.733
0.400
ETS1
M10496_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CETS1_Q6
0.733
0.400
ETS1
M10497_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETS1_04
0.733
0.400
ETS1
M10498_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETS1_06
0.733
0.400
ETS1
M10499_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETS1_B
0.733
0.400
ETS2
M10511_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETS2_Q4
0.733
0.400
ETS2
M10512_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETS2_Q6
0.733
0.400
ETS2
M04779_2.00
Homo sapiens
DACAGGAWGYRYWTCCTGTH
DACAGGAWRYRCWTCCTGTH
SELEX
Yin et al.(2017)
ETS2_FL_Methyl-HT-SELEX
0.733
0.400
For this family, TFs with SR scores >
0.717
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000987201-mRNA-1
Ets
157
221
QLWQFLIALLDDKESQHLICWTGRTLEFKLNDPEEVRYSYDKLCHVQLMQNRDASEDSQTNTKRS
Links
Other
Ets
family TFs
Other
Trichobilharzia regenti
TFs
429 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy