CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM04G12170
(
Oryza glumaepatula
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
OGLUM04G12170
T179877_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G12170.1
FAR1
217
306
EFYRYYGWKVGFNVRKEYANKSKKTGEITSRKFACSREGYRANVKRGNHMVPMPDSRTGCNAHLVIRRKKPGAKLEVYAFQPRHNHPLFA
OGLUM04G12170.2
FAR1
217
306
EFYRYYGWKVGFNVRKEYANKSKKTGEITSRKFACSREGYRANVKRGNHMVPMPDSRTGCNAHLVIRRKKPGAKLEVYAFQPRHNHPLFA
Links
Other
FAR1
family TFs
Other
Oryza glumaepatula
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC04G10470
Oryza punctata
OPUNC04G10470
N
1.000
ORGLA04G0094900
Oryza glaberrima
ORGLA04G0094900
N
1.000
OS04G0421700
Oryza sativa
OS04G0421700
N
1.000
ONIVA04G10490
Oryza nivara
ONIVA04G10490
N
1.000
OLONG_015224
Oryza longistaminata
OLONG_015224
N
1.000
BGIOSGA015115
Oryza indica
BGIOSGA015115
N
1.000
OB04G19620
Oryza brachyantha
OB04G19620
N
0.966