CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_010536
(
Oryza longistaminata
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
OLONG_010536
T179890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_010536-R1
FAR1
11
97
EFYKAYAARLGFVVRKSNKSKNSRHTVTRRLFVCSKQGFRQEPKKPPQDEAAAAASSSPPPRCPDSRTGCLASLTIKLLPSANAFRT
OLONG_010536-R1
FAR1
103
174
AFYNRYAEHVGFSVRRSYKKRKRGVIVSRIFVCSREGVSDRAKHESIAIFLRRYETMLEEHRSKKLQADVDG
OLONG_010536-R2
FAR1
11
97
EFYKAYAARLGFVVRKSNKSKNSRHTVTRRLFVCSKQGFRQEPKKPPQDEAAAAASSSPPPRCPDSRTGCLASLTIKLLPSANAFRT
OLONG_010536-R2
FAR1
103
174
AFYNRYAEHVGFSVRRSYKKRKRGVIVSRIFVCSREGVSDRAKHESIAIFLRRYETMLEEHRSKKLQADVDG
Links
Other
FAR1
family TFs
Other
Oryza longistaminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS07G0496300
Oryza sativa
OS07G0496300
N
0.889
ORGLA07G0123500
Oryza glaberrima
ORGLA07G0123500
N
0.881
Traes_2AS_1683BEFD0
Triticum aestivum
Traes_2AS_1683BEFD0
N
0.874
MLOC_2737
Hordeum vulgare
MLOC_2737
N
0.867
Traes_2BS_C9299F976
Triticum aestivum
Traes_2BS_C9299F976
N
0.859
Pavir.J10702
Panicum virgatum
Pavir.J10702
N
0.844
Pavir.Ba00914
Panicum virgatum
Pavir.Ba00914
N
0.844
Sb02g033910
Sorghum bicolor
Sb02g033910
N
0.837
GRMZM2G406651
Zea mays
GRMZM2G406651
N
0.837
Si033400m.g
Setaria italica
Si033400m.g
N
0.830