POPTR_0002s20030 (Populus trichocarpa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 POPTR_0002s20030 T180068_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s20030.1 FAR1 62 156

Links

Other FAR1 family TFs
Other Populus trichocarpa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.989
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.967
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.967
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.956
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.944
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.944
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.933
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.933
MDP0000786741 Malus domestica MDP0000786741 N 0.922
MDP0000233216 Malus domestica MDP0000233216 N 0.922
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.922
Pm008290 Prunus mume Pm008290 N 0.922
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.922
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.922
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.911
PK12746.1 Cannabis sativa PK12746.1 N 0.911
29889.m003255 Ricinus communis 29889.m003255 N 0.900
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.889
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.889
TCM_021310 Theobroma cacao TCM_021310 N 0.889
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.889
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.889
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.878
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.878
SapurV1A.0060s0220 Salix purpurea SapurV1A.0060s0220 N 0.796
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.733
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.733
Pm003854 Prunus mume Pm003854 N 0.733
PK06148.1 Cannabis sativa PK06148.1 N 0.733
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.722
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.722
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.722
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.722
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.722
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.722
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.722
29685.m000503 Ricinus communis 29685.m000503 N 0.722
TCM_041141 Theobroma cacao TCM_041141 N 0.711
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.711
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.711
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.711
MDP0000234814 Malus domestica MDP0000234814 N 0.708
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.700
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.700
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.700
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.700
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.700
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.700
FRS11 Arabidopsis thaliana AT1G10240 N 0.700
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.700