POPTR_0017s05820 (Populus trichocarpa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 POPTR_0017s05820 T180112_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s05820.1 FAR1 19 109

Links

Other FAR1 family TFs
Other Populus trichocarpa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N 0.989
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N 0.989
cassava19693.m1 Manihot esculenta cassava19693.m1 N 0.989
cassava45111.m1 Manihot esculenta cassava45111.m1 N 0.978
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.967
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.967
29569.m000148 Ricinus communis 29569.m000148 N 0.967
TCM_020035 Theobroma cacao TCM_020035 N 0.956
PK06282.1 Cannabis sativa PK06282.1 N 0.933
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N 0.933
GLYMA06G48170 Glycine max GLYMA06G48170 N 0.922
GLYMA04G12273 Glycine max GLYMA04G12273 N 0.922
Cla017785 Citrullus lanatus Cla017785 N 0.922
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N 0.922
Cucsa.242980 Cucumis sativus Cucsa.242980 N 0.911
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N 0.911
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N 0.911
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N 0.900
Carubv10024069m.g Capsella rubella Carubv10024069m.g N 0.889
Cagra.3706s0015 Capsella grandiflora Cagra.3706s0015 N 0.889
AT2G43280 Arabidopsis thaliana AT2G43280 N 0.878
MTR_3g006370 Medicago truncatula MTR_3g006370 N 0.878
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N 0.878
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N 0.867
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N 0.867
Bra037723 Brassica rapa Bra037723 N 0.822
Bo4g194230 Brassica oleracea Bo4g194230 N 0.822
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N 0.811
POPTR_0007s01910 Populus trichocarpa POPTR_0007s01910 N 0.800
Bra037724 Brassica rapa Bra037724 N 0.790
Bo4g194220 Brassica oleracea Bo4g194220 N 0.774
VIT_00s0174g00130 Vitis vinifera VIT_00s0174g00130 N 0.722
SapurV1A.0071s0660 Salix purpurea SapurV1A.0071s0660 N 0.711
POPTR_0002s24040 Populus trichocarpa POPTR_0002s24040 N 0.700
evm.TU.supercontig_8.54 Carica papaya evm.TU.supercontig_8.54 N 0.700