CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g022400
(
Sorghum bicolor
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
Sb04g022400
T180304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g022400.1
FAR1
92
180
KLYCDYGHRMGFSIRKGKQSYFTGTKRIRTKDYFCSKEGLKEGEKLTDTNFNDPHTRTNCRAMVRFRVNDQGEWKVIRLVSDHNHNLAK
Sb04g022400.2
FAR1
92
180
KLYCDYGHRMGFSIRKGKQSYFTGTKRIRTKDYFCSKEGLKEGEKLTDTNFNDPHTRTNCRAMVRFRVNDQGEWKVIRLVSDHNHNLAK
Links
Other
FAR1
family TFs
Other
Sorghum bicolor
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G043250
Zea mays
GRMZM2G043250
N
0.978
Si016477m.g
Setaria italica
Si016477m.g
N
0.966
Pavir.Aa01718
Panicum virgatum
Pavir.Aa01718
N
0.955
OB02G27690
Oryza brachyantha
OB02G27690
N
0.955
BRADI3G45470
Brachypodium distachyon
BRADI3G45470
N
0.955
Pavir.Ab01899
Panicum virgatum
Pavir.Ab01899
N
0.944
ORGLA02G0172700
Oryza glaberrima
ORGLA02G0172700
N
0.933
ONIVA02G22250
Oryza nivara
ONIVA02G22250
N
0.933
BGIOSGA006277
Oryza indica
BGIOSGA006277
N
0.933
OS02G0550900
Oryza sativa
OS02G0550900
N
0.933
Traes_4AL_8B3A3CC2F
Triticum aestivum
Traes_4AL_8B3A3CC2F
N
0.899
Traes_7DS_016F8E2EA
Triticum aestivum
Traes_7DS_016F8E2EA
N
0.899
MLOC_43316
Hordeum vulgare
MLOC_43316
N
0.899
OLONG_002410
Oryza longistaminata
OLONG_002410
N
0.897
TRIUR3_03719
Triticum urartu
TRIUR3_03719
N
0.730
Traes_7DS_559DD9894
Triticum aestivum
Traes_7DS_559DD9894
N
0.730
Traes_7BS_1B525AFF5
Triticum aestivum
Traes_7BS_1B525AFF5
N
0.730
OS06G0166100
Oryza sativa
OS06G0166100
N
0.730
ORGLA06G0040800
Oryza glaberrima
ORGLA06G0040800
N
0.730
BGIOSGA022378
Oryza indica
BGIOSGA022378
N
0.730
MLOC_13034
Hordeum vulgare
MLOC_13034
N
0.730
OLONG_014957
Oryza longistaminata
OLONG_014957
N
0.730
ONIVA06G05610
Oryza nivara
ONIVA06G05610
N
0.730
GRMZM2G048987
Zea mays
GRMZM2G048987
N
0.719
Pavir.Ba00843
Panicum virgatum
Pavir.Ba00843
N
0.719
Pavir.Bb02863
Panicum virgatum
Pavir.Bb02863
N
0.719
OB06G14070
Oryza brachyantha
OB06G14070
N
0.719
Si029002m.g
Setaria italica
Si029002m.g
N
0.719
OB12G13670
Oryza brachyantha
OB12G13670
N
0.719
Sb02g034560
Sorghum bicolor
Sb02g034560
N
0.719
Sb08g003780
Sorghum bicolor
Sb08g003780
N
0.719
OLONG_000187
Oryza longistaminata
OLONG_000187
N
0.708
ORGLA12G0035900
Oryza glaberrima
ORGLA12G0035900
N
0.708
Pavir.Cb02030
Panicum virgatum
Pavir.Cb02030
N
0.708
OS12G0160900
Oryza sativa
OS12G0160900
N
0.708
Pavir.Ca00202
Panicum virgatum
Pavir.Ca00202
N
0.708
BRADI1G48350
Brachypodium distachyon
BRADI1G48350
N
0.708
GRMZM2G034868
Zea mays
GRMZM2G034868
N
0.708
BRADI4G41960
Brachypodium distachyon
BRADI4G41960
N
0.708
Si009370m.g
Setaria italica
Si009370m.g
N
0.708
BGIOSGA037035
Oryza indica
BGIOSGA037035
N
0.708