TCM_030416 (Theobroma cacao)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 TCM_030416 T180513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY28958 FAR1 68 160
EOY28959 FAR1 68 160
EOY28960 FAR1 68 160
EOY28961 FAR1 68 160
EOY28962 FAR1 68 160
EOY28963 FAR1 68 160

Links

Other FAR1 family TFs
Other Theobroma cacao TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.978
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.978
29758.m000681 Ricinus communis 29758.m000681 N 0.978
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.978
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.966
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.966
MDP0000249284 Malus domestica MDP0000249284 N 0.966
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.966
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.966
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.966
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.955
Ca_07896 Cicer arietinum Ca_07896 N 0.955
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.955
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.955
PK07950.1 Cannabis sativa PK07950.1 N 0.944
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.921
Eucgr.L00168 Eucalyptus grandis Eucgr.L00168 N 0.865
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.787
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.787
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.787
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.787
TCM_020251 Theobroma cacao TCM_020251 N 0.787
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.787
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.775
Pm015052 Prunus mume Pm015052 N 0.775
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.775
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.775
PK09224.1 Cannabis sativa PK09224.1 N 0.775
Eucgr.D01455 Eucalyptus grandis Eucgr.D01455 N 0.767
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.764
mgf004308m Mimulus guttatus mgf004308m N 0.764
28859.m000324 Ricinus communis 28859.m000324 N 0.764
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.764
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.753
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.753
Bo2g152930 Brassica oleracea Bo2g152930 N 0.753
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.742
FRS10 Arabidopsis thaliana AT5G28530 N 0.742
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.742
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.742
Bra020611 Brassica rapa Bra020611 N 0.708