CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_05s0102g00390
(
Vitis vinifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
VIT_05s0102g00390
T180842_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_05s0102g00390.t01
FAR1
45
135
AFYEEYARRVGFLTRIISSRKSERDGSIISRRLACNKEGFNLNSQKTGRVRIRKRESKREGCMAMILVKREKLGKWVVTKFVREHNHPLVI
Links
Other
FAR1
family TFs
Other
Vitis vinifera
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0007s01920
Populus trichocarpa
POPTR_0007s01920
N
0.873
SapurV1A.0834s0170
Salix purpurea
SapurV1A.0834s0170
N
0.822
SapurV1A.1078s0020
Salix purpurea
SapurV1A.1078s0020
N
0.822
TCM_020033
Theobroma cacao
TCM_020033
N
0.822
orange1.1g028041m.g
Citrus sinensis
orange1.1g028041m.g
N
0.789
Ciclev10021846m.g
Citrus clementina
Ciclev10021846m.g
N
0.789
evm.TU.supercontig_9.288
Carica papaya
evm.TU.supercontig_9.288
N
0.767
Aquca_058_00067
Aquilegia coerulea
Aquca_058_00067
N
0.733