CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29804.m001547
(
Ricinus communis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
29804.m001547
T181013_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29804.m001547
FAR1
33
120
VGDFAVSQGYVVTIKQSKRDRVVILGCDRGGVYRNRRKAAEESSAERIRKRKSGSRLTNCPFECVGKKDDGLWILTIKNGTHNHEPLK
Links
Other
FAR1
family TFs
Other
Ricinus communis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002231mg
Prunus persica
PRUPE_ppa002231mg
N
0.890
gene27124-v1.0-hybrid
Fragaria vesca
gene27124-v1.0-hybrid
N
0.878
Gorai.005G226900
Gossypium raimondii
Gorai.005G226900
N
0.866
Eucgr.I02605
Eucalyptus grandis
Eucgr.I02605
N
0.852
VIT_03s0132g00230
Vitis vinifera
VIT_03s0132g00230
N
0.815
MDP0000168881
Malus domestica
MDP0000168881
N
0.744
cassava12560.valid.m1
Manihot esculenta
cassava12560.valid.m1
N
0.741
evm.TU.supercontig_20.29
Carica papaya
evm.TU.supercontig_20.29
N
0.741
ALDH6B2
Populus trichocarpa
POPTR_0005s19150
N
0.732
Cla014312
Citrullus lanatus
Cla014312
N
0.726
PK09964.1
Cannabis sativa
PK09964.1
N
0.714