cassava19693.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava19693.m1 T181033_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19693.m1 FAR1 66 156

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N 0.989
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.978
29569.m000148 Ricinus communis 29569.m000148 N 0.978
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.978
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N 0.978
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N 0.978
TCM_020035 Theobroma cacao TCM_020035 N 0.967
cassava45111.m1 Manihot esculenta cassava45111.m1 N 0.967
PK06282.1 Cannabis sativa PK06282.1 N 0.944
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N 0.944
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N 0.933
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N 0.922
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N 0.922
Cla017785 Citrullus lanatus Cla017785 N 0.922
GLYMA04G12273 Glycine max GLYMA04G12273 N 0.922
GLYMA06G48170 Glycine max GLYMA06G48170 N 0.922
Cucsa.242980 Cucumis sativus Cucsa.242980 N 0.911
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N 0.900
MTR_3g006370 Medicago truncatula MTR_3g006370 N 0.889
Cagra.3706s0015 Capsella grandiflora Cagra.3706s0015 N 0.889
Carubv10024069m.g Capsella rubella Carubv10024069m.g N 0.889
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N 0.878
AT2G43280 Arabidopsis thaliana AT2G43280 N 0.878
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N 0.878
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N 0.867
Bra037723 Brassica rapa Bra037723 N 0.822
Bo4g194230 Brassica oleracea Bo4g194230 N 0.822
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N 0.811
Bra037724 Brassica rapa Bra037724 N 0.790
POPTR_0007s01910 Populus trichocarpa POPTR_0007s01910 N 0.787
Bo4g194220 Brassica oleracea Bo4g194220 N 0.774
VIT_00s0174g00130 Vitis vinifera VIT_00s0174g00130 N 0.733
SapurV1A.0071s0660 Salix purpurea SapurV1A.0071s0660 N 0.711
evm.TU.supercontig_8.54 Carica papaya evm.TU.supercontig_8.54 N 0.711
POPTR_0002s24040 Populus trichocarpa POPTR_0002s24040 N 0.700