cassava40936.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava40936.m1 T181059_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40936.m1 FAR1 18 110

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29758.m000681 Ricinus communis 29758.m000681 N 0.989
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.966
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.966
TCM_030416 Theobroma cacao TCM_030416 N 0.966
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.955
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.955
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.955
MDP0000249284 Malus domestica MDP0000249284 N 0.944
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.944
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.944
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.944
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.933
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.933
Ca_07896 Cicer arietinum Ca_07896 N 0.933
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.933
PK07950.1 Cannabis sativa PK07950.1 N 0.921
Eucgr.L00168 Eucalyptus grandis Eucgr.L00168 N 0.854
Eucgr.D01455 Eucalyptus grandis Eucgr.D01455 N 0.767
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N 0.764
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 0.764
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.764
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.764
FRS10 Vitis vinifera VIT_12s0057g00960 N 0.764
TCM_020251 Theobroma cacao TCM_020251 N 0.764
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.753
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.753
PK09224.1 Cannabis sativa PK09224.1 N 0.753
Pm015052 Prunus mume Pm015052 N 0.753
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.753
28859.m000324 Ricinus communis 28859.m000324 N 0.742
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.742
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.742
mgf004308m Mimulus guttatus mgf004308m N 0.742
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.730
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.730
Bo2g152930 Brassica oleracea Bo2g152930 N 0.730
FRS10 Arabidopsis thaliana AT5G28530 N 0.719
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.719
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.719
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.719