cassava45111.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava45111.m1 T181062_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava45111.m1 FAR1 55 145

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1606s0030 Salix purpurea SapurV1A.1606s0030 N 0.989
SapurV1A.3204s0030 Salix purpurea SapurV1A.3204s0030 N 0.989
POPTR_0017s05820 Populus trichocarpa POPTR_0017s05820 N 0.978
cassava19693.m1 Manihot esculenta cassava19693.m1 N 0.967
orange1.1g030419m.g Citrus sinensis orange1.1g030419m.g N 0.967
Ciclev10022249m.g Citrus clementina Ciclev10022249m.g N 0.967
Cla017785 Citrullus lanatus Cla017785 N 0.944
29569.m000148 Ricinus communis 29569.m000148 N 0.944
Cucsa.242980 Cucumis sativus Cucsa.242980 N 0.933
Gorai.005G128700 Gossypium raimondii Gorai.005G128700 N 0.933
TCM_020035 Theobroma cacao TCM_020035 N 0.933
PK06282.1 Cannabis sativa PK06282.1 N 0.933
Eucgr.A00281 Eucalyptus grandis Eucgr.A00281 N 0.911
Eucgr.A00087 Eucalyptus grandis Eucgr.A00087 N 0.911
gene21668-v1.0-hybrid Fragaria vesca gene21668-v1.0-hybrid N 0.900
GLYMA04G12273 Glycine max GLYMA04G12273 N 0.900
GLYMA06G48170 Glycine max GLYMA06G48170 N 0.900
PRUPE_ppa011038mg Prunus persica PRUPE_ppa011038mg N 0.900
Cagra.3706s0015 Capsella grandiflora Cagra.3706s0015 N 0.889
fgenesh2_kg.4__2495__AT2G43280.1 Arabidopsis lyrata fgenesh2_kg.4__2495__AT2G43280.1 N 0.878
AT2G43280 Arabidopsis thaliana AT2G43280 N 0.878
Thhalv10001648m.g Eutrema salsugineum Thhalv10001648m.g N 0.867
Carubv10024069m.g Capsella rubella Carubv10024069m.g N 0.867
MTR_3g006370 Medicago truncatula MTR_3g006370 N 0.867
chr3.CM0047.280.nc Lotus japonicus chr3.CM0047.280.nc N 0.856
Bra037723 Brassica rapa Bra037723 N 0.833
Bo4g194230 Brassica oleracea Bo4g194230 N 0.833
POPTR_0007s01910 Populus trichocarpa POPTR_0007s01910 N 0.813
Bra037724 Brassica rapa Bra037724 N 0.790
Aquca_058_00049 Aquilegia coerulea Aquca_058_00049 N 0.789
Bo4g194220 Brassica oleracea Bo4g194220 N 0.774
VIT_00s0174g00130 Vitis vinifera VIT_00s0174g00130 N 0.700