evm.TU.supercontig_113.2 (Carica papaya)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 evm.TU.supercontig_113.2 T181374_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_113.2 FAR1 62 156

Links

Other FAR1 family TFs
Other Carica papaya TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.933
29685.m000503 Ricinus communis 29685.m000503 N 0.933
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.922
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.922
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.911
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.911
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.911
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.911
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.911
Pm003854 Prunus mume Pm003854 N 0.911
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.911
TCM_041141 Theobroma cacao TCM_041141 N 0.900
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.900
FRS11 Arabidopsis thaliana AT1G10240 N 0.900
PK06148.1 Cannabis sativa PK06148.1 N 0.900
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.900
MDP0000234814 Malus domestica MDP0000234814 N 0.899
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.889
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.889
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.889
Bo5g010680 Brassica oleracea Bo5g010680 N 0.889
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.889
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.889
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.889
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.878
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.856
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.822
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.800
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.800
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.789
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.789
OB04G20960 Oryza brachyantha OB04G20960 N 0.767
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.733
OS04G0443000 Oryza sativa OS04G0443000 N 0.733
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.733
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.722
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.700
Si012297m.g Setaria italica Si012297m.g N 0.700
29889.m003255 Ricinus communis 29889.m003255 N 0.700