evm.TU.supercontig_8.288 (Carica papaya)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 evm.TU.supercontig_8.288 T181382_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.911 0.911
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.911 0.911
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_8.288 FAR1 88 190

Links

Other FAR1 family TFs
Other Carica papaya TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action