Gorai.006G255400 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.006G255400 T181501_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G255400.1 FAR1 71 146
Gorai.006G255400.1 FAR1 225 301
Gorai.006G255400.2 FAR1 46 121
Gorai.006G255400.2 FAR1 200 276

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021065 Theobroma cacao TCM_021065 N 0.890
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N 0.876
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N 0.843
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.843
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.843
FRS7 Arabidopsis thaliana AT3G06250 N 0.837
FRS12 Arabidopsis thaliana AT5G18960 N 0.830
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.830
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.830
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.825
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.824
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N 0.824
Carubv10000255m.g Capsella rubella Carubv10000255m.g N 0.824
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.824
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N 0.818
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.817
Bo3g013440 Brassica oleracea Bo3g013440 N 0.817
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.810
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.799
PK22885.1 Cannabis sativa PK22885.1 N 0.797
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.791
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.791
Pm008044 Prunus mume Pm008044 N 0.784
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.784
MDP0000295749 Malus domestica MDP0000295749 N 0.771
MDP0000254218 Malus domestica MDP0000254218 N 0.760
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.745
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.740
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.725
Solyc10g084220.1 Solanum lycopersicum Solyc10g084220.1 N 0.721
mgf010461m Mimulus guttatus mgf010461m N 0.719
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.719
mgf011099m Mimulus guttatus mgf011099m N 0.712