orange1.1g025532m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g025532m.g T181621_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g025532m FAR1 86 174

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N 1.000
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N 0.955
cassava30288.valid.m1 Manihot esculenta cassava30288.valid.m1 N 0.955
Cucsa.094440 Cucumis sativus Cucsa.094440 N 0.944
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N 0.944
Cla010925 Citrullus lanatus Cla010925 N 0.944
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N 0.944
MDP0000618200 Malus domestica MDP0000618200 N 0.944
SapurV1A.4098s0020 Salix purpurea SapurV1A.4098s0020 N 0.933
PK13380.1 Cannabis sativa PK13380.1 N 0.933
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N 0.933
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N 0.933
TCM_020020 Theobroma cacao TCM_020020 N 0.933
27914.m000423 Ricinus communis 27914.m000423 N 0.933
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N 0.921
cassava38728.m1 Manihot esculenta cassava38728.m1 N 0.921
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N 0.910
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N 0.910
POPTR_0017s05780 Populus trichocarpa POPTR_0017s05780 N 0.910
MDP0000348552 Malus domestica MDP0000348552 N 0.909
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N 0.899
MTR_2g098920 Medicago truncatula MTR_2g098920 N 0.899
Ca_02686 Cicer arietinum Ca_02686 N 0.899
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N 0.899
Solyc06g073200.2 Solanum lycopersicum Solyc06g073200.2 N 0.894
GLYMA15G03440 Glycine max GLYMA15G03440 N 0.888
mgf020729m Mimulus guttatus mgf020729m N 0.888
MTR_4g067290 Medicago truncatula MTR_4g067290 N 0.865
GLYMA11G13610 Glycine max GLYMA11G13610 N 0.854
GLYMA12G05600 Glycine max GLYMA12G05600 N 0.843
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N 0.831
Carubv10017836m.g Capsella rubella Carubv10017836m.g N 0.831
Cagra.5954s0021 Capsella grandiflora Cagra.5954s0021 N 0.831
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N 0.831
Bo8g093280 Brassica oleracea Bo8g093280 N 0.820
Bra003377 Brassica rapa Bra003377 N 0.820
Bo6g076470 Brassica oleracea Bo6g076470 N 0.820
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N 0.809
AT3G59470 Arabidopsis thaliana AT3G59470 N 0.809
gene21527-v1.0-hybrid Fragaria vesca gene21527-v1.0-hybrid N 0.700