orange1.1g047253m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g047253m.g T181650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g047253m FAR1 62 156

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.989
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.933
Pm003854 Prunus mume Pm003854 N 0.933
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.933
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.933
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.922
PK06148.1 Cannabis sativa PK06148.1 N 0.922
29685.m000503 Ricinus communis 29685.m000503 N 0.922
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.911
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.900
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.900
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.889
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.889
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.889
TCM_041141 Theobroma cacao TCM_041141 N 0.889
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.889
MDP0000234814 Malus domestica MDP0000234814 N 0.888
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.878
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.867
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.867
FRS11 Arabidopsis thaliana AT1G10240 N 0.856
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.833
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.833
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.833
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.822
Bo5g010680 Brassica oleracea Bo5g010680 N 0.822
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.811
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.789
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.789
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.789
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.789
OB04G20960 Oryza brachyantha OB04G20960 N 0.778
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.733
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.733
PK12746.1 Cannabis sativa PK12746.1 N 0.733
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.733
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.733
OS04G0443000 Oryza sativa OS04G0443000 N 0.733
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.733
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.733
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.733
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.722
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.722
Pm008290 Prunus mume Pm008290 N 0.722
MDP0000786741 Malus domestica MDP0000786741 N 0.722
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.722
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.722
MDP0000233216 Malus domestica MDP0000233216 N 0.722
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.711
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.711
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.711
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.711
Si012297m.g Setaria italica Si012297m.g N 0.711
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.711
29889.m003255 Ricinus communis 29889.m003255 N 0.711
TCM_021310 Theobroma cacao TCM_021310 N 0.700
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.700