CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Da01665
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Da01665
T181702_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Da01665.1.p
FAR1
26
118
QFYNAYALGKGFSVRKRYVEWNSDHTELTLRRFVCRRQIYREEKYVKKEIKKRRPRDITRVGCPAKLVIALDRNSGQWYVKNFIDEHNHPLAP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab00925
Panicum virgatum
Pavir.Ab00925
N
0.911
Pavir.Ea01546
Panicum virgatum
Pavir.Ea01546
N
0.911
Pavir.Ib01630
Panicum virgatum
Pavir.Ib01630
N
0.900
Pavir.J35119
Panicum virgatum
Pavir.J35119
N
0.889
Pavir.Ea01890
Panicum virgatum
Pavir.Ea01890
N
0.883
Pavir.J30092
Panicum virgatum
Pavir.J30092
N
0.878
Pavir.Ba03191
Panicum virgatum
Pavir.Ba03191
N
0.865
Pavir.Hb01564
Panicum virgatum
Pavir.Hb01564
N
0.857
Pavir.Cb01092
Panicum virgatum
Pavir.Cb01092
N
0.844
Pavir.J35278
Panicum virgatum
Pavir.J35278
N
0.844
Pavir.Eb02394
Panicum virgatum
Pavir.Eb02394
N
0.813
Pavir.J35643
Panicum virgatum
Pavir.J35643
N
0.811
Traes_5BL_FC8AB1380
Triticum aestivum
Traes_5BL_FC8AB1380
N
0.800
Sb08g002650
Sorghum bicolor
Sb08g002650
N
0.746
Sb02g007217
Sorghum bicolor
Sb02g007217
N
0.700
Sb03g047180
Sorghum bicolor
Sb03g047180
N
0.700
Sb02g027384
Sorghum bicolor
Sb02g027384
N
0.700