CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea01890
(
Panicum virgatum
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Pavir.Ea01890
T181713_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea01890.1.p
FAR1
26
103
QFYNAYALSKGFSVRKSYVEWNSDHTEISLRRYEIKKRRPRDITRVGCPAKLVIALDRNSGQWYVKNFIDEHNHPLVP
Links
Other
FAR1
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J30092
Panicum virgatum
Pavir.J30092
N
0.922
Pavir.Ib01630
Panicum virgatum
Pavir.Ib01630
N
0.896
Pavir.Ea01546
Panicum virgatum
Pavir.Ea01546
N
0.896
Pavir.Da01665
Panicum virgatum
Pavir.Da01665
N
0.883
Pavir.Ab00925
Panicum virgatum
Pavir.Ab00925
N
0.870
Pavir.J35119
Panicum virgatum
Pavir.J35119
N
0.831
Pavir.J35643
Panicum virgatum
Pavir.J35643
N
0.831
Pavir.Ba03191
Panicum virgatum
Pavir.Ba03191
N
0.818
Pavir.Cb01092
Panicum virgatum
Pavir.Cb01092
N
0.792
Pavir.J35278
Panicum virgatum
Pavir.J35278
N
0.711