CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0154s0240
(
Salix purpurea
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
SapurV1A.0154s0240
T181910_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FHY3
M08114_2.00
Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN
ChIP-seq
Mathelier et al.(2014)
MA0557.1
0.878
0.878
FHY3
M09540_2.00
Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN
Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711
0.878
0.878
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0154s0240.1.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.2.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.3.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.4.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.5.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.6.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
SapurV1A.0154s0240.7.p
FAR1
86
188
SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRSRQTKQDPENGTSRRSCSKTDCKASMHVKRRPDGKWVIHSFMKEHNHGLLP
Links
Other
FAR1
family TFs
Other
Salix purpurea
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy