Thhalv10020053m.g (Eutrema salsugineum)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Thhalv10020053m.g T181959_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FHY3
M08114_2.00
Arabidopsis thaliana
NHCACGCGCTNN

NNAGCGCGTGDN
ChIP-seq
Mathelier et al.(2014)
MA0557.1
0.978 0.978
FHY3
M09540_2.00
Arabidopsis thaliana
NHSACGCGCBNN

NNVGCGCGTSDN
Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711
0.978 0.978
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020053m FAR1 91 193
Thhalv10020054m FAR1 91 193

Links

Other FAR1 family TFs
Other Eutrema salsugineum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI20095 Acyrthosiphon pisum ACYPI20095 N 0.000
ACYPI36331 Acyrthosiphon pisum ACYPI36331 N 0.000
TTRE_0000247601 Trichuris trichiura TTRE_0000247601 N 0.000