CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1367571g003
(
Phoenix dactylifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
PDK_20s1367571g003
T182060_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1367571g003
FAR1
25
113
EFYNTYAENVGFFVRRSTLWTTSKNIITRRTFVCSREGFREKKKGAKEAKCPRPETRIGCPACMTIRLTPNGRYRVTEFVPNHNHQLAA
PDK_20s1367571g003
FAR1
154
242
EFYSMYAGRIGFSIRRASMTMSAENVITRRMFVCSREGFREKKKGAKRVKKPRPETRTGCPACMIIRLTPSGKYHVTEFVTYHNHPLAV
Links
Other
FAR1
family TFs
Other
Phoenix dactylifera
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2BL_E5C380F21
Triticum aestivum
Traes_2BL_E5C380F21
N
0.874
BGIOSGA025948
Oryza indica
BGIOSGA025948
N
0.865
Traes_2AS_70DFD1AE1
Triticum aestivum
Traes_2AS_70DFD1AE1
N
0.865
OS07G0563600
Oryza sativa
OS07G0563600
N
0.865
Traes_2DS_7FB19CC37
Triticum aestivum
Traes_2DS_7FB19CC37
N
0.865
ORGLA07G0152100
Oryza glaberrima
ORGLA07G0152100
N
0.865
TRIUR3_28019
Triticum urartu
TRIUR3_28019
N
0.865
Pavir.Bb03075
Panicum virgatum
Pavir.Bb03075
N
0.860
Sb02g036450
Sorghum bicolor
Sb02g036450
N
0.860
BRADI1G24700
Brachypodium distachyon
BRADI1G24700
N
0.860
GRMZM2G129311
Zea mays
GRMZM2G129311
N
0.860
Pavir.J13372
Panicum virgatum
Pavir.J13372
N
0.854
MLOC_76708
Hordeum vulgare
MLOC_76708
N
0.848