CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1556451g004
(
Phoenix dactylifera
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
PDK_20s1556451g004
T182068_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1556451g004
FAR1
91
182
TFYIAYAGRIGFSVRIARSRRSKCNESVIMLRFVCSREGFSREKRIIAGKKTRKRAASIREGCKAMLEVIRRGDEKWVVTKLVKEHNHEVGM
PDK_20s1556451g004
FAR1
214
306
TYYYAYASRVGFEARVRQSRRSLHDESLKMLKLVCSKHRYHSGRDNNSDDSKRLQIQDPNKEGCEALFEIIRKDGDVWVVSKLVLEHTHELTP
Links
Other
FAR1
family TFs
Other
Phoenix dactylifera
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028053
Oryza indica
BGIOSGA028053
N
0.794
Pavir.Fa01859
Panicum virgatum
Pavir.Fa01859
N
0.794
OB08G14200
Oryza brachyantha
OB08G14200
N
0.793
Sb07g004380
Sorghum bicolor
Sb07g004380
N
0.789
Si015801m.g
Setaria italica
Si015801m.g
N
0.789
GRMZM2G302323
Zea mays
GRMZM2G302323
N
0.783
Pavir.Fb00442
Panicum virgatum
Pavir.Fb00442
N
0.778
MLOC_56869
Hordeum vulgare
MLOC_56869
N
0.772
Traes_5BL_CCDB985ED
Triticum aestivum
Traes_5BL_CCDB985ED
N
0.761
Traes_5AL_0DF34352F
Triticum aestivum
Traes_5AL_0DF34352F
N
0.761
Traes_5DL_4ABC24378
Triticum aestivum
Traes_5DL_4ABC24378
N
0.761